ACUA002616 (Anopheles culicifacies)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ACUA002616 T231460_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.867 0.982
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.867 0.982
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.867 0.982
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.867 0.982
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.867 0.965
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.867 0.965
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.867 0.965
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.867 0.965
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.867 0.965
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.965
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.965
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.965
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.965
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.965
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.965
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.947
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.947
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACUA002616-PA Homeodomain 159 215

Links

Other Homeodomain family TFs
Other Anopheles culicifacies TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG013371.1 Alligator sinensis Alligator_sinensis_CCG013371.1 N
ANCCEY_14935 Ancylostoma ceylanicum ANCCEY_14935 N
AARA009355 Anopheles arabiensis AARA009355 N
ACOM031370 Anopheles coluzzii ACOM031370 N
AEPI003098 Anopheles epiroticus AEPI003098 N
AEPI009274 Anopheles epiroticus AEPI009274 N
AMEC017016 Anopheles melas AMEC017016 N
AMEM000352 Anopheles merus AMEM000352 N
AQUA001972 Anopheles quadriannulatus AQUA001972 N
ACEP15823 Atta cephalotes ACEP15823 N
ACEP19659 Atta cephalotes ACEP19659 N
BGLB001603 Biomphalaria glabrata BGLB001603 N
KLF6 Bos taurus ENSBTAG00000015188 N
ENSBTAG00000048085 Bos taurus ENSBTAG00000048085 N
estExt_fgenesh2_pg.C_20012 Branchiostoma floridae estExt_fgenesh2_pg.C_20012 N
Bm11731 Brugia malayi Bm11731 N
Bm12319 Brugia malayi Bm12319 N
Brh_R001625 Buceros rhinoceros Brh_R001625 N
Brh_R008554 Buceros rhinoceros Brh_R008554 N
KLF6 Callithrix jacchus ENSCJAG00000032379 I
Cflo_00615--XP_001121679.1_APIME Camponotus floridanus Cflo_00615--XP_001121679.1_APIME N
Cflo_01443--XP_624772.1_APIME Camponotus floridanus Cflo_01443--XP_624772.1_APIME N
Cflo_16445--XP_624772.1_APIME Camponotus floridanus Cflo_16445--XP_624772.1_APIME N
CLEC000374 Cimex lectularius CLEC000374 N
CLEC013286 Cimex lectularius CLEC013286 N
CpipJ_CPIJ012901 Culex pipiens CpipJ_CPIJ012901 N
CPIJ012901 Culex quinquefasciatus CPIJ012901 N
klf4 Danio rerio ENSDARG00000079922 N
GA25126 Drosophila pseudoobscura FBgn0246509 N
GA28679 Drosophila pseudoobscura FBgn0250039 N
KLF1 Echinops telfairi ENSETEG00000002006 N
ENSFALG00000014565 Ficedula albicollis ENSFALG00000014565 N
ENSGMOG00000013781 Gadus morhua ENSGMOG00000013781 N
ENSGALG00000028383 Gallus gallus ENSGALG00000028383 N
HHAL000942-PA Halyomorpha halys HHAL000942-PA N
HHAL008173-PA Halyomorpha halys HHAL008173-PA N
Hsal_02965--XP_624772.1_APIME Harpegnathos saltator Hsal_02965--XP_624772.1_APIME N
KLF6 Homo sapiens ENSG00000067082 D
HDID_0000086901 Hymenolepis diminuta HDID_0000086901 N
ISCW004118 Ixodes scapularis ISCW004118 N
ENSLOCG00000003791 Lepisosteus oculatus ENSLOCG00000003791 I
LDEC024398 Leptinotarsa decemlineata LDEC024398 N
LDEC010928 Leptinotarsa decemlineata LDEC010928 N
LLOJ001749 Lutzomyia longipalpis LLOJ001749 N
MESCA001789 Megaselia scalaris MESCA001789 N
KLF5 Ochotona princeps ENSOPRG00000007620 N
ENSOPRG00000000197 Ochotona princeps ENSOPRG00000000197 N
Ocbimv22007603m.g Octopus bimaculoides Ocbimv22007603m.g N
Ogr05338 Ophisaurus gracilis Ogr05338 N
KLF12 Oryctolagus cuniculus ENSOCUG00000004244 N
ENSOARG00000018838 Ovis aries ENSOARG00000018838 N
PHUM399820 Pediculus humanus PHUM399820 N
ENSPSIG00000008887 Pelodiscus sinensis ENSPSIG00000008887 N
PPAI010678 Phlebotomus papatasi PPAI010678 N
ENSPFOG00000015451 Poecilia formosa ENSPFOG00000015451 I
Pvit_06515 Pogona vitticeps Pvit_06515 N
KLF3 Procavia capensis ENSPCAG00000015573 N
KLF1 Pteropus vampyrus ENSPVAG00000014711 N
Klf7 Rattus norvegicus ENSRNOG00000012961 N
RPRC011844 Rhodnius prolixus RPRC011844 N
Sakowv30032823m.g Saccoglossus kowalevskii Sakowv30032823m.g I
ENSSHAG00000001834 Sarcophilus harrisii ENSSHAG00000001834 N
SINV23345 Solenopsis invicta SINV23345 N
ENSSARG00000006987 Sorex araneus ENSSARG00000006987 N
SMAR000017 Strigamia maritima SMAR000017 N
KLF15 Taeniopygia guttata ENSTGUG00000008214 N
TC003611 Tribolium castaneum TC003611 N
KLF3 Tupaia belangeri ENSTBEG00000015639 N
ENSTTRG00000010639 Tursiops truncatus ENSTTRG00000010639 N
Tal_R005095 Tyto alba Tal_R005095 N
Tal_R002680 Tyto alba Tal_R002680 N
L798_04124 Zootermopsis nevadensis L798_04124 N