CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AFAF013036
(
Anopheles farauti
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
AFAF013036
T231752_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.704
0.542
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.704
0.542
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.704
0.542
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.704
0.542
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.704
0.542
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.704
0.542
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.704
0.542
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.704
0.542
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.704
0.542
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.662
0.333
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.662
0.333
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.662
0.333
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AFAF013036-PA
Homeodomain
22
69
RRSRTNFNSWQLEELERAFSASHYPDVFMREALAMRLDLKESRVAFIY
Links
Other
Homeodomain
family TFs
Other
Anopheles farauti
TFs
1154 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MCYG_04601
Arthroderma otae
MCYG_04601
N
e_gw1.00168.159.1
Aspergillus carbonarius
e_gw1.00168.159.1
N
ACLA_057380
Aspergillus clavatus
CADACLAG00005479
N
CADAFLAG00013320
Aspergillus flavus
CADAFLAG00013320
N
AFUA_8G04050
Aspergillus fumigatus
CADAFUAG00003174
N
CADANGAG00013376
Aspergillus niger
CADANGAG00013376
N
CADAORAG00009949
Aspergillus oryzae
CADAORAG00009949
N
BDDG_01560
Blastomyces dermatitidis
BDDG_01560
N
PVAR5_2342
Byssochlamys spectabilis
PVAR5_2342
N
A1O1_08815
Capronia coronata
A1O1_08815
N
PV04_10035
Capronia semiimmersa
PV04_10035
N
Z519_12336
Cladophialophora bantiana
Z519_12336
N
G647_09336
Cladophialophora carrionii
G647_09336
N
PV07_08929
Cladophialophora immunda
PV07_08929
N
A1O5_12074
Cladophialophora psammophila
A1O5_12074
N
A1O7_09385
Cladophialophora yegresii
A1O7_09385
N
CIMG_04403
Coccidioides immitis
CIMG_04403
N
CPC735_073390
Coccidioides posadasii
CPC735_073390
N
HMPREF1541_02517
Cyphellophora europaea
HMPREF1541_02517
N
EPUS_06048
Endocarpon pusillum
EPUS_06048
N
A1O9_05599
Exophiala aquamarina
A1O9_05599
N
HMPREF1120_09077
Exophiala dermatitidis
HMPREF1120_09077
N
PV10_01710
Exophiala mesophila
PV10_01710
N
PV06_06886
Exophiala oligosperma
PV06_06886
N
PV11_05777
Exophiala sideris
PV11_05777
N
PV08_07435
Exophiala spinifera
PV08_07435
N
PV05_03864
Exophiala xenobiotica
PV05_03864
N
Z517_09513
Fonsecaea pedrosoi
Z517_09513
N
HCBG_07066
Histoplasma capsulatum
HCBG_07066
N
MCYG_04601
Microsporum canis
MCYG_04601
N
NFIA_096760
Neosartorya fischeri
CADNFIAG00008980
N
Pc22g10070
Penicillium chrysogenum
Pc22g10070
N
PEX1_097650
Penicillium expansum
PEX1_097650
N
PITC_007200
Penicillium italicum
PITC_007200
N
PDE_00973
Penicillium oxalicum
PDE_00973
N
PCH_Pc22g10070
Penicillium rubens
PCH_Pc22g10070
N
Z518_07681
Rhinocladiella mackenziei
Z518_07681
N