CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGLB007215
(
Biomphalaria glabrata
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
BGLB007215
T232427_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.718
0.422
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.718
0.422
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.718
0.422
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.718
0.422
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.718
0.422
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.718
0.422
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.718
0.422
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.718
0.422
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.718
0.422
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.695
0.467
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.695
0.467
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.695
0.467
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGLB007215-PA
Homeodomain
36
80
RKARTAFTDHQLSVLEKTFERQKYLSVQDRMELASKLNLTDTQAA
Links
Other
Homeodomain
family TFs
Other
Biomphalaria glabrata
TFs
1231 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB00149.1
Alternaria brassicicola
AB00149.1
I
AOL_s00080g148
Arthrobotrys oligospora
AOL_s00080g148
I
MCYG_05889
Arthroderma otae
MCYG_05889
I
e_gw1.00009.336.1
Aspergillus carbonarius
e_gw1.00009.336.1
I
ACLA_091820
Aspergillus clavatus
CADACLAG00008439
I
CADAFLAG00007181
Aspergillus flavus
CADAFLAG00007181
I
AFUA_2G03020
Aspergillus fumigatus
CADAFUAG00003420
I
ANIA_04524
Aspergillus nidulans
CADANIAG00005916
D
CADAORAG00008664
Aspergillus oryzae
CADAORAG00008664
I
ATEG_09592
Aspergillus terreus
CADATEAG00004701
I
M437DRAFT_72532
Aureobasidium melanogenum
M437DRAFT_72532
I
M438DRAFT_354692
Aureobasidium pullulans
M438DRAFT_354692
I
BBA_03262
Beauveria bassiana
BBA_03262
I
COCC4DRAFT_156032
Bipolaris maydis
COCC4DRAFT_156032
I
COCMIDRAFT_32036
Bipolaris oryzae
COCMIDRAFT_32036
I
COCSADRAFT_213056
Bipolaris sorokiniana
COCSADRAFT_213056
I
COCVIDRAFT_83639
Bipolaris victoriae
COCVIDRAFT_83639
I
COCCADRAFT_36163
Bipolaris zeicola
COCCADRAFT_36163
I
BDDG_01946
Blastomyces dermatitidis
BDDG_01946
I
PVAR5_1965
Byssochlamys spectabilis
PVAR5_1965
I
CHGG_05536
Chaetomium globosum
CHGG_05536
I
CTHT_0071270
Chaetomium thermophilum
CTHT_0071270
I
CIMG_04575
Coccidioides immitis
CIMG_04575
I
CPC735_072160
Coccidioides posadasii
CPC735_072160
I
estExt_Genewise1Plus.C_21297
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_21297
I
CFIO01_13556
Colletotrichum fioriniae
CFIO01_13556
I
CGGC5_5234
Colletotrichum gloeosporioides
CGGC5_5234
I
GLRG_00217
Colletotrichum graminicola
GLRG_00217
I
CH063_08705
Colletotrichum higginsianum
CH063_08705
I
Cob_12050
Colletotrichum orbiculare
Cob_12050
I
CSUB01_05543
Colletotrichum sublineola
CSUB01_05543
I
W97_06488
Coniosporium apollinis
W97_06488
I
H072_4198
Dactylellina haptotyla
H072_4198
I
DOTSEDRAFT_116530
Dothistroma septosporum
DOTSEDRAFT_116530
I
EPUS_02974
Endocarpon pusillum
EPUS_02974
I
FFUJ_07927
Fusarium fujikuroi
FFUJ_07927
I
FGRRES_02538
Fusarium graminearum
FGRRES_02538
I
FOXG_10566
Fusarium oxysporum
FOXG_10566
I
FPSE_08658
Fusarium pseudograminearum
FPSE_08658
I
NechaG81864
Fusarium solani
NechaG81864
I
FVEG_09213
Fusarium verticillioides
FVEG_09213
I
LEMA_P069020.1
Leptosphaeria maculans
LEMA_P069020.1
I
MPH_09871
Macrophomina phaseolina
MPH_09871
I
MCYG_05889
Microsporum canis
MCYG_05889
I
MGYG_06082
Microsporum gypseum
MGYG_06082
I
MYCTH_50303
Myceliophthora thermophila
MYCTH_50303
I
gw1.13.456.1
Mycosphaerella fijiensis
gw1.13.456.1
I
gw1.1.3793.1
Mycosphaerella graminicola
gw1.1.3793.1
I
fgenesh1_pg.sca_20_chr6_4_0000490
Nectria haematococca
fgenesh1_pg.sca_20_chr6_4_0000490
I
UCRNP2_4750
Neofusicoccum parvum
UCRNP2_4750
I
NFIA_035370
Neosartorya fischeri
CADNFIAG00003845
I
NCU07834
Neurospora crassa
NCU07834
D
estExt_fgenesh2_pg.C_200015
Neurospora discreta
estExt_fgenesh2_pg.C_200015
I
NEUTE1DRAFT_80911
Neurospora tetrasperma
NEUTE1DRAFT_80911
I
F503_08470
Ophiostoma piceae uamh
F503_08470
I
PABG_01081
Paracoccidioides brasiliensis
PABG_01081
I
PAAG_06795
Paracoccidioides sp lutzii
PAAG_06795
I
PMAA_055660
Penicillium marneffei
PMAA_055660
I
PFICI_05808
Pestalotiopsis fici
PFICI_05808
I
SNOG_09800
Phaeosphaeria nodorum
SNOG_09800
I
MYCFIDRAFT_112048
Pseudocercospora fijiensis
MYCFIDRAFT_112048
I
V499_03771
Pseudogymnoascus pannorum
V499_03771
I
PTT_08996
Pyrenophora teres
PTT_08996
I
PTRG_10693
Pyrenophora triticirepentis
PTRG_10693
I
SETTUDRAFT_41277
Setosphaeria turcica
SETTUDRAFT_41277
I
SMAC_02112
Sordaria macrospora
SMAC_02112
I
SEPMUDRAFT_140497
Sphaerulina musiva
SEPMUDRAFT_140497
I
HMPREF1624_06657
Sporothrix schenckii
HMPREF1624_06657
I
SNOG_09800
Stagonospora nodorum
SNOG_09800
I
PMAA_055660
Talaromyces marneffei
PMAA_055660
I
TSTA_016710
Talaromyces stipitatus
TSTA_016710
I
TEQG_06366
Trichophyton equinum
TEQG_06366
I
H101_05733
Trichophyton interdigitale
H101_05733
I
GSTUM_00007236001
Tuber melanosporum
GSTUM_00007236001
I
PV09_00458
Verruconis gallopava
PV09_00458
I
VDAG_10303
Verticillium dahliae
VDAG_10303
I
Mycgr3G28684
Zymoseptoria tritici
Mycgr3G28684
I