CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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augustus_masked-nMf.1.1.scaf09259-processed-gene-0.1
(
Meloidogyne floridensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
augustus_masked-nMf.1.1.scaf09259-processed-gene-0.1
T233191_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf09259-processed-gene-0.1-mRNA-1
Homeodomain
1
57
RFQRTIITDRQKEALIFIYIHEQRPNSKLIEQLAAKVGLQPRTVNNWFHNHRTRNKE
Links
Other
Homeodomain
family TFs
Other
Meloidogyne floridensis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_20381
Ancylostoma duodenale
ANCDUO_20381
N
0.725
BTMF_0001337801
Brugia timori
BTMF_0001337801
N
0.637
CGOC_0001023801
Cylicostephanus goldi
CGOC_0001023801
N
0.693
TELCIR_08430
Teladorsagia circumcincta
TELCIR_08430
N
0.685
TCLT_0000655301
Thelazia callipaeda
TCLT_0000655301
N
0.641