HmN_000469000 (Hymenolepis microstoma)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 HmN_000469000 T234311_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG08197
M02064_2.00 		Caenorhabditis briggsae
NNDACDNN
NNHGTHNN		 PBM
Weirauch et al.(2014)
pTH6408 		0.635 0.614
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.600 0.719
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.600 0.719
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.600 0.719
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.600 0.702
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HmN_000469000 Homeodomain 174 233

Links

Other Homeodomain family TFs
Other Hymenolepis microstoma TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M378DRAFT_42727 Amanita muscaria M378DRAFT_42727 N
BOTBODRAFT_76690 Botryobasidium botryosum BOTBODRAFT_76690 N
BOTBODRAFT_73079 Botryobasidium botryosum BOTBODRAFT_73079 N
DACRYDRAFT_52998 Dacryopinax sp DACRYDRAFT_52998 N
FOMPIDRAFT_1091714 Fomitopsis pinicola FOMPIDRAFT_1091714 N
GYMLUDRAFT_107672 Gymnopus luxurians GYMLUDRAFT_107672 N
M413DRAFT_71958 Hebeloma cylindrosporum M413DRAFT_71958 N
HETIRDRAFT_248182 Heterobasidion irregulare HETIRDRAFT_248182 N
HYDPIDRAFT_46608 Hydnomerulius pinastri HYDPIDRAFT_46608 N
JAAARDRAFT_132180 Jaapia argillacea JAAARDRAFT_132180 N
MPER_04209 Moniliophthora perniciosa MPER_04209 N
fgenesh1_pg.C_scaffold_5000337 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_5000337 N
PILCRDRAFT_57008 Piloderma croceum PILCRDRAFT_57008 N
PILCRDRAFT_82466 Piloderma croceum PILCRDRAFT_82466 N
PISMIDRAFT_80466 Pisolithus microcarpus PISMIDRAFT_80466 N
M404DRAFT_88423 Pisolithus tinctorius M404DRAFT_88423 N
SERLA73DRAFT_50420 Serpula lacrymans SERLA73DRAFT_50420 N
M422DRAFT_119565 Sphaerobolus stellatus M422DRAFT_119565 N
CY34DRAFT_51775 Suillus luteus CY34DRAFT_51775 N