CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L893_g4071
(
Steinernema glaseri
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
L893_g4071
T234898_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L893_g4071.t1
Homeodomain
435
486
AIYEDECXXXXKELYEETHDPTREQRMNVAKKTGLPLDKVTKWFQNQRHKRN
L893_g4071.t2
Homeodomain
431
482
AIYEDECXXXXKELYEETHDPTREQRMNVAKKTGLPLDKVTKWFQNQRHKRN
Links
Other
Homeodomain
family TFs
Other
Steinernema glaseri
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR03G29370
Leersia perrieri
LPERR03G29370
N
OBART03G34930
Oryza barthii
OBART03G34930
N
OB03G41880
Oryza brachyantha
OB03G41880
N
ORGLA03G0319700
Oryza glaberrima
ORGLA03G0319700
N
OGLUM03G34660
Oryza glumaepatula
OGLUM03G34660
N
OMERI03G31980
Oryza meridionalis
OMERI03G31980
N
ONIVA03G36430
Oryza nivara
ONIVA03G36430
N
OPUNC03G31970
Oryza punctata
OPUNC03G31970
N
ORUFI03G36360
Oryza rufipogon
ORUFI03G36360
N
OS03G0759700
Oryza sativa
OS03G0759700
N
Pavir.Ia00382
Panicum virgatum
Pavir.Ia00382
N
Sb01g007440
Sorghum bicolor
Sb01g007440
N
GRMZM2G009837
Zea mays
GRMZM2G009837
N
GRMZM2G074501
Zea mays
GRMZM2G074501
N