CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
maker-nMf.1.1.scaf08801-snap-gene-0.8
(
Meloidogyne floridensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
maker-nMf.1.1.scaf08801-snap-gene-0.8
T235050_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf08801-snap-gene-0.8-mRNA-1
Homeodomain
2
52
AKNFNLTALKRKFQADCYPDVRTKNELAKNLGLPAGVIGEWFKNKRQKERE
Links
Other
Homeodomain
family TFs
Other
Meloidogyne floridensis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA05G07066
Glycine max
GLYMA05G07066
N
GLYMA10G26265
Glycine max
GLYMA10G26265
N
GLYMA13G02241
Glycine max
GLYMA13G02241
N
GLYMA18G14551
Glycine max
GLYMA18G14551
N
GLYMA18G23910
Glycine max
GLYMA18G23910
N
GLYMA19G08820
Glycine max
GLYMA19G08820
N
GLYMA20G16793
Glycine max
GLYMA20G16793
N
GLYMA20G21351
Glycine max
GLYMA20G21351
N
LjSGA_019514.3
Lotus japonicus
LjSGA_019514.3
N