nAv.1.0.1.g05377 (Acanthocheilonema viteae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 nAv.1.0.1.g05377 T235195_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG24578
M02065_2.00 		Caenorhabditis briggsae
NNNTGACAKSTN
NASMTGTCANNN		 PBM
Weirauch et al.(2014)
pTH6524 		0.599 0.472
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nAv.1.0.1.t05377-RA Homeodomain 143 199

Links

Other Homeodomain family TFs
Other Acanthocheilonema viteae TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00021p00218190 Amborella trichopoda AMTR_s00021p00218190 N 0.000
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.000
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.000
fgenesh1_pg.scaffold_823000001 Physcomitrella patens fgenesh1_pg.scaffold_823000001 N 0.000
SELMODRAFT_73108 Selaginella moellendorffii SELMODRAFT_73108 N 0.000
SELMODRAFT_73109 Selaginella moellendorffii SELMODRAFT_73109 N 0.000
SELMODRAFT_73110 Selaginella moellendorffii SELMODRAFT_73110 N 0.000
SELMODRAFT_73111 Selaginella moellendorffii SELMODRAFT_73111 N 0.000
SELMODRAFT_73112 Selaginella moellendorffii SELMODRAFT_73112 N 0.000
SELMODRAFT_73113 Selaginella moellendorffii SELMODRAFT_73113 N 0.000
SELMODRAFT_73116 Selaginella moellendorffii SELMODRAFT_73116 N 0.000
SELMODRAFT_73117 Selaginella moellendorffii SELMODRAFT_73117 N 0.000
SELMODRAFT_73278 Selaginella moellendorffii SELMODRAFT_73278 N 0.000