nLs.2.1.2.g05836 (Litomosoides sigmodontis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 nLs.2.1.2.g05836 T235422_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HESX1
M03187_2.00 		Homo sapiens
NHTAATTRVH
DBYAATTADN		 SELEX
Jolma et al.(2013)
HESX1_1 		0.660 0.230
HESX1
M03188_2.00 		Homo sapiens
NTAATTRGYAATTAD
HTAATTRCYAATTAN		 SELEX
Jolma et al.(2013)
HESX1_2 		0.660 0.230
HESX1
M05227_2.00 		Homo sapiens
DYAATTRV
BYAATTRH		 SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX 		0.660 0.230
HESX1
M05228_2.00 		Homo sapiens
NYAATTRD
HYAATTRN		 SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX 		0.660 0.230
NOBOX
M09135_2.00 		Homo sapiens
HTAATTRVB
VBYAATTAD		 Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C 		0.650 0.361
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t05836-RA Homeodomain 146 188
nLs.2.1.2.t05836-RA Homeodomain 232 249

Links

Other Homeodomain family TFs
Other Litomosoides sigmodontis TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000017562 Ailuropoda melanoleuca ENSAMEG00000017562 N
Alligator_sinensis_CCG004396.1 Alligator sinensis Alligator_sinensis_CCG004396.1 N
ENSAPLG00000007731 Anas platyrhynchos ENSAPLG00000007731 N
ZBTB41 Anolis carolinensis ENSACAG00000009459 N
Afo_R004000 Aptenodytes forsteri Afo_R004000 N
ENSP00000356375-D1 Bos grunniens ENSP00000356375-D1 N
ZBTB41 Bos taurus ENSBTAG00000002291 N
Brh_R011240 Buceros rhinoceros Brh_R011240 N
ZBTB41 Callithrix jacchus ENSCJAG00000004794 N
Cmyd_10004225 Chelonia mydas Cmyd_10004225 N
ENSCSAG00000013610 Chlorocebus sabaeus ENSCSAG00000013610 N
ENSFALG00000002807 Ficedula albicollis ENSFALG00000002807 N
ENSGMOG00000002344 Gadus morhua ENSGMOG00000002344 N
ENSGALG00000002305 Gallus gallus ENSGALG00000002305 N
zbtb41 Gasterosteus aculeatus ENSGACG00000016102 N
Gfo_R006641 Geospiza fortis Gfo_R006641 N
ZBTB41 Gorilla gorilla ENSGGOG00000004843 N
ZBTB41 Homo sapiens ENSG00000177888 N
ZBTB41 Loxodonta africana ENSLAFG00000012902 N
ENSP00000356375 Macaca fascicularis ENSP00000356375 N
ZBTB41 Monodelphis domestica ENSMODG00000012684 N
Zbtb41 Mus musculus ENSMUSG00000033964 N
Myotis_brandtii_ZBTB41_10008236 Myotis brandtii Myotis_brandtii_ZBTB41_10008236 N
ZBTB41 Myotis lucifugus ENSMLUG00000016964 N
ENSNLEG00000018056 Nomascus leucogenys ENSNLEG00000018056 N
ENSONIG00000010729 Oreochromis niloticus ENSONIG00000010729 N
ZBTB41 Oryctolagus cuniculus ENSOCUG00000014765 N
ZBTB41 Otolemur garnettii ENSOGAG00000012893 N
ENSOARG00000015070 Ovis aries ENSOARG00000015070 N
ZBTB41 Pan troglodytes ENSPTRG00000001808 N
ENSPFOG00000006537 Poecilia formosa ENSPFOG00000006537 N
ENSPPYG00000000388 Pongo abelii ENSPPYG00000000388 N
Zbtb41 Rattus norvegicus ENSRNOG00000011137 N
ZBTB41 Taeniopygia guttata ENSTGUG00000004282 N
zbtb41 Takifugu rubripes ENSTRUG00000009203 N
zbtb41 Tetraodon nigroviridis ENSTNIG00000007805 N
ZBTB41 Tursiops truncatus ENSTTRG00000008689 N
Tal_R010443 Tyto alba Tal_R010443 N
ZBTB41 Vicugna pacos ENSVPAG00000006551 N
zbtb41 Xenopus tropicalis XB-GENE-877334 N
ENSXMAG00000004794 Xiphophorus maculatus ENSXMAG00000004794 N