CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCUD_0001254201
(
Schistosoma curassoni
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
SCUD_0001254201
T236040_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SCUD_0001254201-mRNA-1
Homeodomain
566
622
KRSRTRLSESQLNILRSYFDINNSPSDEKIYEICNKTGLQEKVVKHWFRNTLFKERQ
SCUD_0001254201-mRNA-1
Homeodomain
1018
1074
RRNRTSITALQSRCMHSIYNYHKTPSVHECDRLGEMIGLSRRVVQVWFQNQRAKEKK
Links
Other
Homeodomain
family TFs
Other
Schistosoma curassoni
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf04706-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf04706-processed-gene-0.0
N
augustus_masked-nMf.1.1.scaf12580-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf12580-processed-gene-0.0
N
snap_masked-nMf.1.1.scaf23364-processed-gene-0.1
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf23364-processed-gene-0.1
N
MhA1_Contig440.frz3.gene9
Meloidogyne hapla
MhA1_Contig440.frz3.gene9
N
Minc00179
Meloidogyne incognita
Minc00179
N