SCUD_0001284101 (Schistosoma curassoni)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SCUD_0001284101 T236041_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.790 0.500
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.790 0.500
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.790 0.500
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.790 0.500
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.790 0.500
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.790 0.500
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.790 0.500
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.790 0.500
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.790 0.500
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.722 0.435
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.722 0.435
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.722 0.435
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SCUD_0001284101-mRNA-1 Homeodomain 298 343

Links

Other Homeodomain family TFs
Other Schistosoma curassoni TFs

1240 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_13316 Aegilops tauschii F775_13316 I 0.000
F775_18344 Aegilops tauschii F775_18344 I 0.000
F775_19160 Aegilops tauschii F775_19160 I 0.000
AMTR_s00009p00109990 Amborella trichopoda AMTR_s00009p00109990 I 0.000
AMTR_s00165p00052010 Amborella trichopoda AMTR_s00165p00052010 I 0.000
BLH2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000308 I 0.000
BLH1 Arabidopsis lyrata fgenesh2_kg.4__1624__AT2G35940.3 I 0.000
BEL1 Arabidopsis lyrata fgenesh2_kg.7__3270__AT5G41410.1 I 0.000
BLH1 Arabidopsis thaliana AT2G35940 I 0.000
BLH6 Arabidopsis thaliana AT4G34610 I 0.000
BLH2 Arabidopsis thaliana AT4G36870 I 0.000
BEL1 Arabidopsis thaliana AT5G41410 I 0.000
Bostr.7200s0155 Boechera stricta Bostr.7200s0155 I 0.000
BRADI1G09615 Brachypodium distachyon BRADI1G09615 I 0.000
BRADI1G51980 Brachypodium distachyon BRADI1G51980 I 0.000
BRADI1G74060 Brachypodium distachyon BRADI1G74060 I 0.000
BRADI1G76940 Brachypodium distachyon BRADI1G76940 I 0.000
BRADI2G23530 Brachypodium distachyon BRADI2G23530 I 0.000
BRADI2G54940 Brachypodium distachyon BRADI2G54940 I 0.000
BRADI3G32040 Brachypodium distachyon BRADI3G32040 I 0.000
Bo1g005330 Brassica oleracea Bo1g005330 I 0.000
Bo3g029830 Brassica oleracea Bo3g029830 I 0.000
Bo3g153820 Brassica oleracea Bo3g153820 I 0.000
Bo4g036190 Brassica oleracea Bo4g036190 I 0.000
Bo4g142080 Brassica oleracea Bo4g142080 I 0.000
Bo4g151860 Brassica oleracea Bo4g151860 I 0.000
Bo4g185820 Brassica oleracea Bo4g185820 I 0.000
Bo5g006800 Brassica oleracea Bo5g006800 I 0.000
Bo7g116960 Brassica oleracea Bo7g116960 I 0.000
Bra005310 Brassica rapa Bra005310 I 0.000
Bra013075 Brassica rapa Bra013075 I 0.000
Bra013076 Brassica rapa Bra013076 I 0.000
Bra017277 Brassica rapa Bra017277 I 0.000
Bra017666 Brassica rapa Bra017666 I 0.000
Bra023045 Brassica rapa Bra023045 I 0.000
Bra025497 Brassica rapa Bra025497 I 0.000
PK14089.1 Cannabis sativa PK14089.1 I 0.000
Cagra.1873s0010 Capsella grandiflora Cagra.1873s0010 I 0.000
Carubv10004359m.g Capsella rubella Carubv10004359m.g I 0.000
Ca_15192 Cicer arietinum Ca_15192 I 0.000
Ca_21219 Cicer arietinum Ca_21219 I 0.000
Ca_25873 Cicer arietinum Ca_25873 I 0.000
Cla018449 Citrullus lanatus Cla018449 I 0.000
Ciclev10011268m.g Citrus clementina Ciclev10011268m.g I 0.000
Ciclev10027955m.g Citrus clementina Ciclev10027955m.g I 0.000
orange1.1g005901m.g Citrus sinensis orange1.1g005901m.g I 0.000
orange1.1g006550m.g Citrus sinensis orange1.1g006550m.g I 0.000
Cucsa.066610 Cucumis sativus Cucsa.066610 I 0.000
Cucsa.175830 Cucumis sativus Cucsa.175830 I 0.000
Cucsa.185900 Cucumis sativus Cucsa.185900 I 0.000
Eucgr.K03046 Eucalyptus grandis Eucgr.K03046 I 0.000
Thhalv10027690m.g Eutrema salsugineum Thhalv10027690m.g I 0.000
GLYMA01G25710 Glycine max GLYMA01G25710 I 0.000
GLYMA01G38650 Glycine max GLYMA01G38650 I 0.000
GLYMA01G43040 Glycine max GLYMA01G43040 I 0.000
GLYMA02G06730 Glycine max GLYMA02G06730 I 0.000
GLYMA03G17397 Glycine max GLYMA03G17397 I 0.000
GLYMA03G36070 Glycine max GLYMA03G36070 I 0.000
GLYMA11G02450 Glycine max GLYMA11G02450 I 0.000
GLYMA11G06640 Glycine max GLYMA11G06640 I 0.000
GLYMA11G18270 Glycine max GLYMA11G18270 I 0.000
GLYMA12G10030 Glycine max GLYMA12G10030 I 0.000
GLYMA12G31480 Glycine max GLYMA12G31480 I 0.000
GLYMA13G38910 Glycine max GLYMA13G38910 I 0.000
GLYMA16G25770 Glycine max GLYMA16G25770 I 0.000
GLYMA18G41280 Glycine max GLYMA18G41280 I 0.000
GLYMA19G38690 Glycine max GLYMA19G38690 I 0.000
Gorai.002G255800 Gossypium raimondii Gorai.002G255800 I 0.000
Gorai.006G115600 Gossypium raimondii Gorai.006G115600 I 0.000
Gorai.011G271200 Gossypium raimondii Gorai.011G271200 I 0.000
Gorai.012G108300 Gossypium raimondii Gorai.012G108300 I 0.000
MLOC_3638 Hordeum vulgare MLOC_3638 I 0.000
MLOC_58467 Hordeum vulgare MLOC_58467 I 0.000
MLOC_62535 Hordeum vulgare MLOC_62535 I 0.000
MLOC_66099 Hordeum vulgare MLOC_66099 I 0.000
MLOC_78149 Hordeum vulgare MLOC_78149 I 0.000
LPERR01G31990 Leersia perrieri LPERR01G31990 I 0.000
LPERR03G01710 Leersia perrieri LPERR03G01710 I 0.000
LPERR03G04270 Leersia perrieri LPERR03G04270 I 0.000
LPERR03G27630 Leersia perrieri LPERR03G27630 I 0.000
LPERR06G00490 Leersia perrieri LPERR06G00490 I 0.000
Lus10021498.g Linum usitatissimum Lus10021498.g I 0.000
Lus10022599.g Linum usitatissimum Lus10022599.g I 0.000
Lus10040256.g Linum usitatissimum Lus10040256.g I 0.000
MDP0000126587 Malus domestica MDP0000126587 I 0.000
MDP0000209399 Malus domestica MDP0000209399 I 0.000
MDP0000429775 Malus domestica MDP0000429775 I 0.000
cassava25006.valid.m1 Manihot esculenta cassava25006.valid.m1 I 0.000
cassava25008.valid.m1 Manihot esculenta cassava25008.valid.m1 I 0.000
cassava25009.valid.m1 Manihot esculenta cassava25009.valid.m1 I 0.000
cassava42275.valid.m1 Manihot esculenta cassava42275.valid.m1 I 0.000
MTR_4g019450 Medicago truncatula MTR_4g019450 I 0.000
MTR_4g051532 Medicago truncatula MTR_4g051532 I 0.000
MTR_5g018860 Medicago truncatula MTR_5g018860 I 0.000
MTR_8g078480 Medicago truncatula MTR_8g078480 I 0.000
mgf003720m Mimulus guttatus mgf003720m I 0.000
GSMUA_Achr10G06670_001 Musa acuminata GSMUA_Achr10G06670_001 I 0.000
GSMUA_Achr11G07620_001 Musa acuminata GSMUA_Achr11G07620_001 I 0.000
GSMUA_Achr1G06400_001 Musa acuminata GSMUA_Achr1G06400_001 I 0.000
GSMUA_Achr2G04310_001 Musa acuminata GSMUA_Achr2G04310_001 I 0.000
GSMUA_Achr4G13590_001 Musa acuminata GSMUA_Achr4G13590_001 I 0.000
GSMUA_Achr5G07020_001 Musa acuminata GSMUA_Achr5G07020_001 I 0.000
GSMUA_Achr6G18180_001 Musa acuminata GSMUA_Achr6G18180_001 I 0.000
GSMUA_Achr7G14960_001 Musa acuminata GSMUA_Achr7G14960_001 I 0.000
OBART01G37260 Oryza barthii OBART01G37260 I 0.000
OBART05G18940 Oryza barthii OBART05G18940 I 0.000
OBART06G00550 Oryza barthii OBART06G00550 I 0.000
OB01G45990 Oryza brachyantha OB01G45990 I 0.000
OB03G11840 Oryza brachyantha OB03G11840 I 0.000
OB03G14910 Oryza brachyantha OB03G14910 I 0.000
ORGLA03G0016400 Oryza glaberrima ORGLA03G0016400 I 0.000
ORGLA03G0046500 Oryza glaberrima ORGLA03G0046500 I 0.000
ORGLA06G0005600 Oryza glaberrima ORGLA06G0005600 I 0.000
OGLUM03G04700 Oryza glumaepatula OGLUM03G04700 I 0.000
OGLUM06G00470 Oryza glumaepatula OGLUM06G00470 I 0.000
BGIOSGA000492 Oryza indica BGIOSGA000492 I 0.000
BGIOSGA011390 Oryza indica BGIOSGA011390 I 0.000
BGIOSGA011748 Oryza indica BGIOSGA011748 I 0.000
BGIOSGA013510 Oryza indica BGIOSGA013510 I 0.000
BGIOSGA022158 Oryza indica BGIOSGA022158 I 0.000
BGIOSGA036588 Oryza indica BGIOSGA036588 I 0.000
BGIOSGA036589 Oryza indica BGIOSGA036589 I 0.000
OLONG_001344 Oryza longistaminata OLONG_001344 I 0.000
OLONG_010053 Oryza longistaminata OLONG_010053 I 0.000
OMERI03G01810 Oryza meridionalis OMERI03G01810 I 0.000
OMERI03G04590 Oryza meridionalis OMERI03G04590 I 0.000
ONIVA03G04660 Oryza nivara ONIVA03G04660 I 0.000
ONIVA05G19780 Oryza nivara ONIVA05G19780 I 0.000
ONIVA06G00550 Oryza nivara ONIVA06G00550 I 0.000
OPUNC03G01710 Oryza punctata OPUNC03G01710 I 0.000
OPUNC03G04600 Oryza punctata OPUNC03G04600 I 0.000
ORUFI03G04600 Oryza rufipogon ORUFI03G04600 I 0.000
ORUFI05G20120 Oryza rufipogon ORUFI05G20120 I 0.000
ORUFI06G00570 Oryza rufipogon ORUFI06G00570 I 0.000
OS01G0848400 Oryza sativa OS01G0848400 I 0.000
OS03G0124000 Oryza sativa OS03G0124000 I 0.000
OS03G0165300 Oryza sativa OS03G0165300 I 0.000
OS06G0108900 Oryza sativa OS06G0108900 I 0.000
Pavir.Ia02908 Panicum virgatum Pavir.Ia02908 I 0.000
Pavir.Ia04290 Panicum virgatum Pavir.Ia04290 I 0.000
Pavir.Ib00072 Panicum virgatum Pavir.Ib00072 I 0.000
Pavir.J15357 Panicum virgatum Pavir.J15357 I 0.000
PDK_20s1306551g001 Phoenix dactylifera PDK_20s1306551g001 I 0.000
PDK_20s1324881g001 Phoenix dactylifera PDK_20s1324881g001 I 0.000
fgenesh1_pg.scaffold_258000001 Physcomitrella patens fgenesh1_pg.scaffold_258000001 I 0.000
POPTR_0001s22430 Populus trichocarpa POPTR_0001s22430 I 0.000
POPTR_0008s06130 Populus trichocarpa POPTR_0008s06130 I 0.000
POPTR_0009s02250 Populus trichocarpa POPTR_0009s02250 I 0.000
POPTR_0010s20480 Populus trichocarpa POPTR_0010s20480 I 0.000
Pm001514 Prunus mume Pm001514 I 0.000
Pm002609 Prunus mume Pm002609 I 0.000
PRUPE_ppa002583mg Prunus persica PRUPE_ppa002583mg I 0.000
PRUPE_ppa002604mg Prunus persica PRUPE_ppa002604mg I 0.000
29973.m000390 Ricinus communis 29973.m000390 I 0.000
30143.m001209 Ricinus communis 30143.m001209 I 0.000
SapurV1A.0214s0100 Salix purpurea SapurV1A.0214s0100 I 0.000
SapurV1A.0216s0040 Salix purpurea SapurV1A.0216s0040 I 0.000
SapurV1A.1280s0040 Salix purpurea SapurV1A.1280s0040 I 0.000
SapurV1A.1412s0040 Salix purpurea SapurV1A.1412s0040 I 0.000
Si006303m.g Setaria italica Si006303m.g I 0.000
Si034720m.g Setaria italica Si034720m.g I 0.000
Si034832m.g Setaria italica Si034832m.g I 0.000
Si034965m.g Setaria italica Si034965m.g I 0.000
Solyc11g068950.1 Solanum lycopersicum Solyc11g068950.1 I 0.000
PGSC0003DMG400005930 Solanum tuberosum PGSC0003DMG400005930 I 0.000
PGSC0003DMG400019635 Solanum tuberosum PGSC0003DMG400019635 I 0.000
PGSC0003DMG400024267 Solanum tuberosum PGSC0003DMG400024267 I 0.000
Sb01g030620 Sorghum bicolor Sb01g030620 I 0.000
Sb01g046170 Sorghum bicolor Sb01g046170 I 0.000
Sb10g000800 Sorghum bicolor Sb10g000800 I 0.000
TCM_021834 Theobroma cacao TCM_021834 I 0.000
TCM_042663 Theobroma cacao TCM_042663 I 0.000
Traes_1BL_2DCDCD191 Triticum aestivum Traes_1BL_2DCDCD191 I 0.000
Traes_4AL_21D75AE88 Triticum aestivum Traes_4AL_21D75AE88 I 0.000
Traes_4AS_4F615C5CC Triticum aestivum Traes_4AS_4F615C5CC I 0.000
Traes_4BL_0F02B2343 Triticum aestivum Traes_4BL_0F02B2343 I 0.000
Traes_4BL_6D714F995 Triticum aestivum Traes_4BL_6D714F995 I 0.000
Traes_4BS_6D714F995 Triticum aestivum Traes_4BS_6D714F995 I 0.000
Traes_4DL_4164D3F4C Triticum aestivum Traes_4DL_4164D3F4C I 0.000
Traes_4DL_5BB7F31ED Triticum aestivum Traes_4DL_5BB7F31ED I 0.000
TRIUR3_16398 Triticum urartu TRIUR3_16398 I 0.000
TRIUR3_26361 Triticum urartu TRIUR3_26361 I 0.000
LSN Vitis vinifera VIT_08s0007g01290 I 0.000
GRMZM2G004641 Zea mays GRMZM2G004641 I 0.000
GRMZM2G013617 Zea mays GRMZM2G013617 I 0.000
GRMZM2G064466 Zea mays GRMZM2G064466 I 0.000
GRMZM2G154641 Zea mays GRMZM2G154641 I 0.000
GRMZM2G327059 Zea mays GRMZM2G327059 I 0.000
GRMZM2G396114 Zea mays GRMZM2G396114 I 0.000