SMRZ_0001120301 (Schistosoma margrebowiei)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SMRZ_0001120301 T236093_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.709 0.500
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.709 0.500
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.709 0.500
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.709 0.500
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.709 0.500
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.709 0.500
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.709 0.500
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.709 0.500
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.709 0.500
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.655 0.375
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.655 0.375
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.655 0.375
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMRZ_0001120301-mRNA-1 Homeodomain 258 305

Links

Other Homeodomain family TFs
Other Schistosoma margrebowiei TFs

1147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI005523 Acyrthosiphon pisum ACYPI005523 I
AAEL012237 Aedes aegypti AAEL012237 I
ENSAMEG00000003472 Ailuropoda melanoleuca ENSAMEG00000003472 I
Alligator_sinensis_CCG022139.1 Alligator sinensis Alligator_sinensis_CCG022139.1 I
AALB008732 Anopheles albimanus AALB008732 I
AARA001274 Anopheles arabiensis AARA001274 I
ACHR003925 Anopheles christyi ACHR003925 I
ACOM035641 Anopheles coluzzii ACOM035641 I
ACUA001438 Anopheles culicifacies ACUA001438 I
ADIR006501 Anopheles dirus ADIR006501 I
AEPI003923 Anopheles epiroticus AEPI003923 I
AFAF015236 Anopheles farauti AFAF015236 I
AFUN000621 Anopheles funestus AFUN000621 I
AGAP003177 Anopheles gambiae AGAP003177 I
AMEC003172 Anopheles melas AMEC003172 I
AMEM013272 Anopheles merus AMEM013272 I
AMIN002759 Anopheles minimus AMIN002759 I
AQUA008115 Anopheles quadriannulatus AQUA008115 I
ASIS001309 Anopheles sinensis ASIS001309 I
ASTEI00681 Anopheles stephensi ASTEI00681 I
GB41968 Apis mellifera GB41968 I
ENSAMXG00000012675 Astyanax mexicanus ENSAMXG00000012675 I
ACEP16358 Atta cephalotes ACEP16358 I
BGIBMGA004944 Bombyx mori BGIBMGA004944 I
ENSBTAP00000023939-D1 Bos grunniens ENSBTAP00000023939-D1 I
fgenesh2_pg.scaffold_132000064 Branchiostoma floridae fgenesh2_pg.scaffold_132000064 I
gw.35.272.1 Branchiostoma floridae gw.35.272.1 I
MAX Callithrix jacchus ENSCJAG00000019702 I
Cflo_05278--XP_623530.1_APIME Camponotus floridanus Cflo_05278--XP_623530.1_APIME I
MAX Canis familiaris ENSCAFG00000016212 I
ENSCPOG00000010172 Cavia porcellus ENSCPOG00000010172 I
Cmyd_10004970 Chelonia mydas Cmyd_10004970 I
ENSCSAG00000013429 Chlorocebus sabaeus ENSCSAG00000013429 I
MAX Choloepus hoffmanni ENSCHOG00000006957 I
CLEC011217 Cimex lectularius CLEC011217 I
ENSCSAVG00000010547 Ciona savignyi ENSCSAVG00000010547 I
CpipJ_CPIJ003297 Culex pipiens CpipJ_CPIJ003297 I
CPIJ003297 Culex quinquefasciatus CPIJ003297 I
KGM_17406 Danaus plexippus KGM_17406 I
max Danio rerio ENSDARG00000024844 I
ENSDNOG00000034422 Dasypus novemcinctus ENSDNOG00000034422 I
YQE_10562 Dendroctonus ponderosae YQE_10562 I
MAX Echinops telfairi ENSETEG00000002967 I
MAX Equus caballus ENSECAG00000006923 I
MAX Erinaceus europaeus ENSEEUG00000003973 I
MAX Felis catus ENSFCAG00000010347 I
ENSFALG00000001190 Ficedula albicollis ENSFALG00000001190 I
ENSGMOG00000003647 Gadus morhua ENSGMOG00000003647 I
ENSGALG00000028248 Gallus gallus ENSGALG00000028248 I
max Gasterosteus aculeatus ENSGACG00000007808 I
MAX Gorilla gorilla ENSGGOG00000026047 I
HHAL010192-PA Halyomorpha halys HHAL010192-PA I
Hsal_16014--XP_623530.1_APIME Harpegnathos saltator Hsal_16014--XP_623530.1_APIME I
MAX Homo sapiens ENSG00000125952 D
ENSSTOG00000028142 Ictidomys tridecemlineatus ENSSTOG00000028142 I
ISCW013570 Ixodes scapularis ISCW013570 I
ENSLACG00000016665 Latimeria chalumnae ENSLACG00000016665 I
LDEC015014 Leptinotarsa decemlineata LDEC015014 I
LotgiG133235 Lottia gigantea LotgiG133235 I
MAX Loxodonta africana ENSLAFG00000018437 I
LCUP011850 Lucilia cuprina LCUP011850 I
LLOJ003470 Lutzomyia longipalpis LLOJ003470 I
ENSP00000351490 Macaca fascicularis ENSP00000351490 I
MAX Macaca mulatta ENSMMUG00000004341 I
MAX Meleagris gallopavo ENSMGAG00000004785 I
ENSMICG00000013124 Microcebus murinus ENSMICG00000013124 I
MAX Monodelphis domestica ENSMODG00000009712 I
MDOA012035 Musca domestica MDOA012035 I
ENSMPUG00000006859 Mustela putorius furo ENSMPUG00000006859 I
Max Mus musculus ENSMUSG00000059436 D
Myotis_brandtii_MAX_10027131 Myotis brandtii Myotis_brandtii_MAX_10027131 I
MAX Myotis lucifugus ENSMLUG00000004318 I
NV15216 Nasonia vitripennis NV15216 I
NEMVEDRAFT_v1g80696 Nematostella vectensis NEMVEDRAFT_v1g80696 I
ENSNLEG00000014373 Nomascus leucogenys ENSNLEG00000014373 I
MAX Ochotona princeps ENSOPRG00000016245 I
Ocbimv22020257m.g Octopus bimaculoides Ocbimv22020257m.g I
Ogr08511 Ophisaurus gracilis Ogr08511 I
MAX Ornithorhynchus anatinus ENSOANG00000005841 I
MAX Oryctolagus cuniculus ENSOCUG00000014439 I
MAX Oryzias latipes ENSORLG00000016817 I
ENSOGAG00000034529 Otolemur garnettii ENSOGAG00000034529 I
ENSOARG00000021159 Ovis aries ENSOARG00000021159 I
MAX Pan troglodytes ENSPTRG00000006449 I
ENSPANG00000020361 Papio anubis ENSPANG00000020361 I
PHUM220200 Pediculus humanus PHUM220200 I
ENSPSIG00000009674 Pelodiscus sinensis ENSPSIG00000009674 I
ENSPFOG00000013150 Poecilia formosa ENSPFOG00000013150 I
ENSPFOG00000017744 Poecilia formosa ENSPFOG00000017744 I
Pvit_16227 Pogona vitticeps Pvit_16227 I
ENSPPYG00000005911 Pongo abelii ENSPPYG00000005911 I
MAX Procavia capensis ENSPCAG00000000840 I
Max Rattus norvegicus ENSRNOG00000008049 I
RPRC015255 Rhodnius prolixus RPRC015255 I
Sakowv30027986m.g Saccoglossus kowalevskii Sakowv30027986m.g I
ENSSHAG00000014285 Sarcophilus harrisii ENSSHAG00000014285 I
SINV12716 Solenopsis invicta SINV12716 I
SPU_022163 Strongylocentrotus purpuratus SPU_022163 I
ENSSSCG00000002282 Sus scrofa ENSSSCG00000002282 I
MAX Takifugu rubripes ENSTRUG00000014760 I
max Takifugu rubripes ENSTRUG00000017815 I
ENSTSYG00000007582 Tarsius syrichta ENSTSYG00000007582 I
tetur05g05490 Tetranychus urticae tetur05g05490 I
MAX Tetraodon nigroviridis ENSTNIG00000000407 I
max Tetraodon nigroviridis ENSTNIG00000016412 I
TC009976 Tribolium castaneum TC009976 I
TriadG51792 Trichoplax adhaerens TriadG51792 I
MAX Tupaia belangeri ENSTBEG00000012645 I
MAX Tursiops truncatus ENSTTRG00000002693 I
max.L Xenopus laevis XB-GENE-6252877 I
max.S Xenopus laevis XB-GENE-6255913 I
max Xenopus tropicalis XB-GENE-6258209 I
ENSXMAG00000014355 Xiphophorus maculatus ENSXMAG00000014355 I