TCNE_0001870701 (Toxocara canis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 TCNE_0001870701 T236839_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN

NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.669 0.250
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN

NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.669 0.250
VSX1
M04941_2.00
Homo sapiens
YYAATTRN

NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.669 0.250
VSX1
M04944_2.00
Homo sapiens
NTAATTRS

SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.669 0.250
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN

NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.669 0.250
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN

NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.669 0.250
VSX1
M04943_2.00
Homo sapiens
YYAATTRN

NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.669 0.250
VSX1
M04945_2.00
Homo sapiens
NTAATTRG

CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.669 0.250
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN

NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.669 0.250
VAX1
M03168_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.661 0.227
VAX1
M05182_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.661 0.227
VAX1
M05183_2.00
Homo sapiens
BTMATKRN

NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.661 0.227
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TCNE_0001870701-mRNA-1 Homeodomain 34 77

Links

Other Homeodomain family TFs
Other Toxocara canis TFs

1169 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSETEG00000011530 Echinops telfairi ENSETEG00000011530 N
ENSETEG00000019668 Echinops telfairi ENSETEG00000019668 N
ENSETEG00000019259 Echinops telfairi ENSETEG00000019259 N
ENSETEG00000019255 Echinops telfairi ENSETEG00000019255 N
ENSETEG00000018213 Echinops telfairi ENSETEG00000018213 N
ENSETEG00000018048 Echinops telfairi ENSETEG00000018048 N
ENSETEG00000016179 Echinops telfairi ENSETEG00000016179 N
ENSETEG00000016176 Echinops telfairi ENSETEG00000016176 N
ENSETEG00000015508 Echinops telfairi ENSETEG00000015508 N
ENSETEG00000015305 Echinops telfairi ENSETEG00000015305 N
ENSETEG00000013074 Echinops telfairi ENSETEG00000013074 N
ENSETEG00000013044 Echinops telfairi ENSETEG00000013044 N
ENSETEG00000012716 Echinops telfairi ENSETEG00000012716 N
ENSETEG00000011531 Echinops telfairi ENSETEG00000011531 N
ENSETEG00000000495 Echinops telfairi ENSETEG00000000495 N
ENSETEG00000008652 Echinops telfairi ENSETEG00000008652 N
ENSETEG00000008647 Echinops telfairi ENSETEG00000008647 N
ENSETEG00000007452 Echinops telfairi ENSETEG00000007452 N
ENSETEG00000005874 Echinops telfairi ENSETEG00000005874 N
ENSETEG00000005168 Echinops telfairi ENSETEG00000005168 N
ENSETEG00000004569 Echinops telfairi ENSETEG00000004569 N
ENSETEG00000002737 Echinops telfairi ENSETEG00000002737 N
ENSETEG00000002571 Echinops telfairi ENSETEG00000002571 N
ENSETEG00000001568 Echinops telfairi ENSETEG00000001568 N
ENSETEG00000001560 Echinops telfairi ENSETEG00000001560 N
ENSETEG00000001507 Echinops telfairi ENSETEG00000001507 N
ENSETEG00000001398 Echinops telfairi ENSETEG00000001398 N