CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCNE_0001870701
(
Toxocara canis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
TCNE_0001870701
T236839_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.669
0.250
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.669
0.250
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.669
0.250
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.669
0.250
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.669
0.250
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.669
0.250
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.669
0.250
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.669
0.250
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.669
0.250
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.661
0.227
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.661
0.227
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.661
0.227
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TCNE_0001870701-mRNA-1
Homeodomain
34
77
RRKRTNLEANQRAALDAYFEQNPHPSNDDIRSIAATLALNREVC
Links
Other
Homeodomain
family TFs
Other
Toxocara canis
TFs
1169 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSETEG00000011530
Echinops telfairi
ENSETEG00000011530
N
ENSETEG00000019668
Echinops telfairi
ENSETEG00000019668
N
ENSETEG00000019259
Echinops telfairi
ENSETEG00000019259
N
ENSETEG00000019255
Echinops telfairi
ENSETEG00000019255
N
ENSETEG00000018213
Echinops telfairi
ENSETEG00000018213
N
ENSETEG00000018048
Echinops telfairi
ENSETEG00000018048
N
ENSETEG00000016179
Echinops telfairi
ENSETEG00000016179
N
ENSETEG00000016176
Echinops telfairi
ENSETEG00000016176
N
ENSETEG00000015508
Echinops telfairi
ENSETEG00000015508
N
ENSETEG00000015305
Echinops telfairi
ENSETEG00000015305
N
ENSETEG00000013074
Echinops telfairi
ENSETEG00000013074
N
ENSETEG00000013044
Echinops telfairi
ENSETEG00000013044
N
ENSETEG00000012716
Echinops telfairi
ENSETEG00000012716
N
ENSETEG00000011531
Echinops telfairi
ENSETEG00000011531
N
ENSETEG00000000495
Echinops telfairi
ENSETEG00000000495
N
ENSETEG00000008652
Echinops telfairi
ENSETEG00000008652
N
ENSETEG00000008647
Echinops telfairi
ENSETEG00000008647
N
ENSETEG00000007452
Echinops telfairi
ENSETEG00000007452
N
ENSETEG00000005874
Echinops telfairi
ENSETEG00000005874
N
ENSETEG00000005168
Echinops telfairi
ENSETEG00000005168
N
ENSETEG00000004569
Echinops telfairi
ENSETEG00000004569
N
ENSETEG00000002737
Echinops telfairi
ENSETEG00000002737
N
ENSETEG00000002571
Echinops telfairi
ENSETEG00000002571
N
ENSETEG00000001568
Echinops telfairi
ENSETEG00000001568
N
ENSETEG00000001560
Echinops telfairi
ENSETEG00000001560
N
ENSETEG00000001507
Echinops telfairi
ENSETEG00000001507
N
ENSETEG00000001398
Echinops telfairi
ENSETEG00000001398
N