CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POU3F4
(
Sus scrofa
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSSSCG00000012454
T238611_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
POU3F4
M00366_2.00
Homo sapiens
NWATKHN
NDMATWN
PBM
Barrera et al.(2016)
POU3F4_REF
1.000
1.000
Pou3f4
M00550_2.00
Mus musculus
NWWATKHNNN
NNNDMATWWN
PBM
Berger et al.(2008)
Pou3f4_3773
1.000
1.000
POU3F4
M03317_2.00
Homo sapiens
TATGCWAAT
ATTWGCATA
SELEX
Jolma et al.(2013)
POU3F4_1
1.000
1.000
POU3F4
M03318_2.00
Homo sapiens
TGMATAAWTHW
WDAWTTATKCA
SELEX
Jolma et al.(2013)
POU3F4_2
1.000
1.000
POU3F4
M05492_2.00
Homo sapiens
NYWYGCATAATB
VATTATGCRWRN
SELEX
Yin et al.(2017)
POU3F4_eDBD_HT-SELEX_1
1.000
1.000
POU3F4
M05493_2.00
Homo sapiens
NTAATGABATGCRN
NYGCATVTCATTAN
SELEX
Yin et al.(2017)
POU3F4_eDBD_HT-SELEX_2
1.000
1.000
POU3F4
M05494_2.00
Homo sapiens
NYGCATWMATTAN
NTAATKWATGCRN
SELEX
Yin et al.(2017)
POU3F4_eDBD_HT-SELEX_3
1.000
1.000
POU3F4
M05495_2.00
Homo sapiens
DHATGYRCRTMD
HKAYGYRCATDH
SELEX
Yin et al.(2017)
POU3F4_eDBD_HT-SELEX_4
1.000
1.000
POU3F4
M05496_2.00
Homo sapiens
DTATGCWAATKRV
BYMATTWGCATAH
SELEX
Yin et al.(2017)
POU3F4_eDBD_HT-SELEX_5
1.000
1.000
POU3F4
M05497_2.00
Homo sapiens
HTAATGAKATGCGH
DCGCATMTCATTAD
SELEX
Yin et al.(2017)
POU3F4_eDBD_Methyl-HT-SELEX_1
1.000
1.000
POU3F4
M05498_2.00
Homo sapiens
DCGCATAAATTAN
NTAATTTATGCGH
SELEX
Yin et al.(2017)
POU3F4_eDBD_Methyl-HT-SELEX_2
1.000
1.000
POU3F4
M05499_2.00
Homo sapiens
DTATGCGCATAH
DTATGCGCATAH
SELEX
Yin et al.(2017)
POU3F4_eDBD_Methyl-HT-SELEX_3
1.000
1.000
POU3F4
M05500_2.00
Homo sapiens
WTATGCWAATKAG
CTMATTWGCATAW
SELEX
Yin et al.(2017)
POU3F4_eDBD_Methyl-HT-SELEX_4
1.000
1.000
For this family, TFs with SR scores >
0.993
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000013252
POU
189
260
PTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD
ENSSSCP00000013252
Homeodomain
279
335
RKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKR
Links
Other
Homeodomain,POU
family TFs
Other
Sus scrofa
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy