CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSP00000356836-D1
(
Bos grunniens
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSP00000356836-D1
T238937_2.00
GigaDB (2015-Oct-22)
NCBI Gene Info:
The OCT1 transcription factor was among the first identified members of the POU transcription factor family (summarized by Sturm et al., 1993 [PubMed 8314572]). Members of this family contain the POU domain, a 160-amino acid region necessary for DNA binding to the octameric sequence ATGCAAAT.[supplied by OMIM, Jul 2010]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
POU2F1
M00377_2.00
Homo sapiens
NNTGMAWAWN
NWTWTKCANN
PBM
Berger et al.(2006)
Oct-1
1.000
1.000
POU2F1
M03308_2.00
Homo sapiens
NDTATGYWAATN
NATTWRCATAHN
SELEX
Jolma et al.(2013)
POU2F1_1
1.000
1.000
POU2F1
M03309_2.00
Homo sapiens
HHTRMATATKCAWN
NWTGMATATKYADD
SELEX
Jolma et al.(2013)
POU2F1_2
1.000
1.000
POU2F1
M09219_2.00
Homo sapiens
RNKBVHATGSAAWYVW
WBRWTTSCATDBVMNY
Misc
Kulakovskiy et al.(2013)
PO2F1_HUMAN.H11MO.0.C
1.000
1.000
POU2F1
M10826_2.00
Homo sapiens
NNVNDTATGCAAATNYNNN
NNNRNATTTGCATAHNBNN
Transfac
Matys et al.(2006)
V$OCT1_01
1.000
1.000
POU2F1
M10827_2.00
Homo sapiens
NNNNTGMATATTCNB
VNGAATATKCANNNN
Transfac
Matys et al.(2006)
V$OCT1_02
1.000
1.000
POU2F1
M10828_2.00
Homo sapiens
NNNRTAATNRNDN
NHNYNATTAYNNN
Transfac
Matys et al.(2006)
V$OCT1_03
1.000
1.000
POU2F1
M10829_2.00
Homo sapiens
DHDNDNNHATGYAWAWNHNWNNW
WNNWNDNWTWTRCATDNNHNHDH
Transfac
Matys et al.(2006)
V$OCT1_04
1.000
1.000
POU2F1
M10830_2.00
Homo sapiens
RRTATGCWAATBMK
MKVATTWGCATAYY
Transfac
Matys et al.(2006)
V$OCT1_05
1.000
1.000
POU2F1
M10831_2.00
Homo sapiens
NRYATSWMAWWNWS
SWNAWTKWSATRYN
Transfac
Matys et al.(2006)
V$OCT1_06
1.000
1.000
POU2F1
M10832_2.00
Homo sapiens
WNTATGBTAATT
AATTAVCATANW
Transfac
Matys et al.(2006)
V$OCT1_07
1.000
1.000
POU2F1
M10833_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OCT1_B
1.000
1.000
POU2F1
M10834_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OCT1_Q5_01
1.000
1.000
POU2F1
M10835_2.00
Homo sapiens
VDVHATGCAAAKNMB
VKNMTTTGCATDBHB
Transfac
Matys et al.(2006)
V$OCT1_Q6
1.000
1.000
POU2F1
M10836_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU2F1_Q4_01
1.000
1.000
POU2F1
M10837_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU2F1_Q4
1.000
1.000
POU2F1
M10838_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$POU2F1_Q6
1.000
1.000
For this family, TFs with SR scores >
0.993
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000356836-D1
POU
289
360
SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE
ENSP00000356836-D1
Homeodomain
388
444
RKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKR
Links
Other
Homeodomain,POU
family TFs
Other
Bos grunniens
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy