CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMAG_06269
(
Allomyces macrogynus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
AMAG_06269
T239459_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.341
0.458
HSFB4
M06936_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFB4_col_a
0.330
0.448
hsf-1
M02249_2.00
Neurospora crassa
NNNTTCBDNN
NNHVGAANNN
PBM
Weirauch et al.(2014)
pTH8857
0.330
0.406
HSFA6A
M06950_2.00
Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_col_a
0.324
0.469
HSFA6A
M06951_2.00
Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a
0.324
0.469
HSFA6B
M06941_2.00
Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a
0.322
0.448
HSFA6B
M06942_2.00
Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_col
0.322
0.448
ANIA_08035
M02247_2.00
Aspergillus nidulans
NNNNTTCYRN
NYRGAANNNN
PBM
Weirauch et al.(2014)
pTH8231
0.322
0.396
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMAG_06269T0
HSF
8
121
FVQKMYSILENGELKDIVSWSASGDSFLVHSPGEFARSVLPRYFKHSNFSSYNRQLNMWGFSKISNLASSPVSTVNSTNSRNGTTEYIEPAWEFRHPFFQRGQVHLLVQIKRKS
Links
Other
HSF
family TFs
Other
Allomyces macrogynus
TFs
522 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000000440
Ailuropoda melanoleuca
ENSAMEG00000000440
I
ENSBTAG00000010255
Bos taurus
ENSBTAG00000010255
I
ZNF24
Callithrix jacchus
ENSCJAG00000021019
I
ZNF24
Canis familiaris
ENSCAFG00000023988
I
ZNF24
Cavia porcellus
ENSCPOG00000014764
I
ENSCSAG00000017907
Chlorocebus sabaeus
ENSCSAG00000017907
I
ZNF24
Dasypus novemcinctus
ENSDNOG00000042508
I
ZNF24
Echinops telfairi
ENSETEG00000005731
I
ZNF24
Equus caballus
ENSECAG00000019986
I
ZNF24
Erinaceus europaeus
ENSEEUG00000004877
I
ZNF24
Felis catus
ENSFCAG00000024495
I
ZNF24
Gorilla gorilla
ENSGGOG00000011228
I
ZNF24
Homo sapiens
ENSG00000172466
D
ENSSTOG00000016187
Ictidomys tridecemlineatus
ENSSTOG00000016187
I
ZNF24
Loxodonta africana
ENSLAFG00000011409
I
ENSP00000382015
Macaca fascicularis
ENSP00000382015
I
ZNF24
Macaca mulatta
ENSMMUG00000009322
I
ENSMEUG00000009258
Macropus eugenii
ENSMEUG00000009258
I
ZNF24
Monodelphis domestica
ENSMODG00000003288
I
ENSMPUG00000001157
Mustela putorius furo
ENSMPUG00000001157
I
Zfp24
Mus musculus
ENSMUSG00000051469
I
Myotis_brandtii_ZNF24_10017289
Myotis brandtii
Myotis_brandtii_ZNF24_10017289
I
ENSNLEG00000006263
Nomascus leucogenys
ENSNLEG00000006263
I
ZNF24
Ochotona princeps
ENSOPRG00000006233
I
ZNF24
Otolemur garnettii
ENSOGAG00000009050
I
ENSOARG00000005687
Ovis aries
ENSOARG00000005687
I
ZNF24
Pan troglodytes
ENSPTRG00000009969
I
ENSPANG00000017683
Papio anubis
ENSPANG00000017683
I
ENSPPYG00000009106
Pongo abelii
ENSPPYG00000009106
I
ZNF24
Procavia capensis
ENSPCAG00000016673
I
ZNF24
Pteropus vampyrus
ENSPVAG00000017441
I
Zfp24
Rattus norvegicus
ENSRNOG00000016562
I
ENSSHAG00000002461
Sarcophilus harrisii
ENSSHAG00000002461
I
ENSSARG00000004974
Sorex araneus
ENSSARG00000004974
I
ZNF24
Sus scrofa
ENSSSCG00000023276
I
ENSTSYG00000000584
Tarsius syrichta
ENSTSYG00000000584
I
ZNF24
Tursiops truncatus
ENSTTRG00000006744
I
ZNF24
Vicugna pacos
ENSVPAG00000005286
I