CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HSF2
(
Sus scrofa
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
ENSSSCG00000004238
T240409_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSF2
M03324_2.00
Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC
SELEX
Jolma et al.(2013)
HSF2_1
0.508
0.975
HSF2
M02744_2.00
Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC
SELEX
Jolma et al.(2010)
HSF2_dimertrimer
0.508
0.975
HSF2
M05505_2.00
Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB
SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX
0.508
0.975
HSF2
M05507_2.00
Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB
SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX
0.508
0.975
HSF2
M09229_2.00
Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB
Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A
0.508
0.975
HSF2
M10859_2.00
Homo sapiens
VGAANNWTCB
VGAWNNTTCB
Transfac
Matys et al.(2006)
V$HSF2_01
0.508
0.975
HSF2
M10860_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF2_02
0.508
0.975
HSF2
M10861_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF2_Q6
0.508
0.975
HSF2
M05506_2.00
Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY
SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX
0.508
0.975
HSF2
M05508_2.00
Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY
SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX
0.508
0.975
Hsf2
M09231_2.00
Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB
Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A
0.498
0.950
hsf2
M02248_2.00
Danio rerio
NNNWGTTCTATNN
NNATAGAACWNNN
PBM
Weirauch et al.(2014)
pTH9010
0.489
0.912
ANIA_08035
M02247_2.00
Aspergillus nidulans
NNNNTTCYRN
NYRGAANNNN
PBM
Weirauch et al.(2014)
pTH8231
0.331
0.500
hsf-1
M02249_2.00
Neurospora crassa
NNNTTCBDNN
NNHVGAANNN
PBM
Weirauch et al.(2014)
pTH8857
0.320
0.475
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000004576
HSF
5
87
LFQNGQSFLVLDEQRFAKEILPKYFKHNNMASFVRQLNMYGFRKVVHIDSGIVKQERDGPVEFQHPYFKQGQDDLLENIKRKV
Links
Other
HSF
family TFs
Other
Sus scrofa
TFs
192 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG011593.1
Alligator sinensis
Alligator_sinensis_CCG011593.1
N
Alligator_sinensis_CCG011592.1
Alligator sinensis
Alligator_sinensis_CCG011592.1
N
ENSAPLG00000007962
Anas platyrhynchos
ENSAPLG00000007962
N
ENSAPLG00000007688
Anas platyrhynchos
ENSAPLG00000007688
N
Afo_R003313
Aptenodytes forsteri
Afo_R003313
N
Afo_R003312
Aptenodytes forsteri
Afo_R003312
N
Brh_R011662
Buceros rhinoceros
Brh_R011662
N
Brh_R011661
Buceros rhinoceros
Brh_R011661
N
Aan_R005911
Calypte anna
Aan_R005911
N
Cmyd_10015932
Chelonia mydas
Cmyd_10015932
N
ENSFALG00000009558
Ficedula albicollis
ENSFALG00000009558
N
ENSFALG00000009565
Ficedula albicollis
ENSFALG00000009565
N
ENSGALG00000001136
Gallus gallus
ENSGALG00000001136
N
ENSGALG00000027002
Gallus gallus
ENSGALG00000027002
N
Gfo_R009739
Geospiza fortis
Gfo_R009739
N
Gfo_R009738
Geospiza fortis
Gfo_R009738
N
ENSMEUG00000001942
Macropus eugenii
ENSMEUG00000001942
N
ENSMGAG00000002000
Meleagris gallopavo
ENSMGAG00000002000
N
ENSMGAG00000001983
Meleagris gallopavo
ENSMGAG00000001983
N
ENSMODG00000008220
Monodelphis domestica
ENSMODG00000008220
N
ENSPSIG00000004060
Pelodiscus sinensis
ENSPSIG00000004060
N
ENSPSIG00000004058
Pelodiscus sinensis
ENSPSIG00000004058
N
Pvit_15590
Pogona vitticeps
Pvit_15590
N
Pvit_15591
Pogona vitticeps
Pvit_15591
N
ENSSHAG00000014651
Sarcophilus harrisii
ENSSHAG00000014651
N
ENSTGUG00000016560
Taeniopygia guttata
ENSTGUG00000016560
N
ENSTGUG00000002877
Taeniopygia guttata
ENSTGUG00000002877
N
ENSTGUG00000002875
Taeniopygia guttata
ENSTGUG00000002875
N
Tal_R007853
Tyto alba
Tal_R007853
N
Tal_R007854
Tyto alba
Tal_R007854
N