GLYMA20G28870 (Glycine max)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 GLYMA20G28870 T240726_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.497 0.862
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.497 0.862
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.443 0.793
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.443 0.793
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.435 0.701
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.435 0.701
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.419 0.759
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.419 0.759
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.414 0.713
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.395 0.644
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.395 0.644
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.383 0.621
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.383 0.621
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.380 0.678
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.354 0.678
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.354 0.678
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.354 0.678
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.341 0.598
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.341 0.598
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA20G28870.1 HSF 45 135

Links

Other HSF family TFs
Other Glycine max TFs

1397 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_31280 Aegilops tauschii F775_31280 I
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I
Aquca_008_00175 Aquilegia coerulea Aquca_008_00175 I
Aquca_013_00067 Aquilegia coerulea Aquca_013_00067 I
ARF9 Arabidopsis lyrata Al_scaffold_0007_1752 I
ARF18 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002633 I
ARF11 Arabidopsis lyrata scaffold_403621.1 I
ARF2 Arabidopsis lyrata scaffold_802850.1 I
ARF11 Arabidopsis thaliana AT2G46530 I
ARF18 Arabidopsis thaliana AT3G61830 I
ARF9 Arabidopsis thaliana AT4G23980 I
ARF2 Arabidopsis thaliana AT5G62000 D
Bostr.13158s0186 Boechera stricta Bostr.13158s0186 I
Bostr.25993s0113 Boechera stricta Bostr.25993s0113 I
Bostr.26833s0038 Boechera stricta Bostr.26833s0038 I
Bostr.7867s0204 Boechera stricta Bostr.7867s0204 I
BRADI3G45880 Brachypodium distachyon BRADI3G45880 I
BRADI4G17410 Brachypodium distachyon BRADI4G17410 I
Bo01141s010 Brassica oleracea Bo01141s010 I
Bo1g037360 Brassica oleracea Bo1g037360 I
Bo2g161810 Brassica oleracea Bo2g161810 I
Bo3g039330 Brassica oleracea Bo3g039330 I
Bo3g108130 Brassica oleracea Bo3g108130 I
Bo4g008150 Brassica oleracea Bo4g008150 I
Bo7g109250 Brassica oleracea Bo7g109250 I
Bo8g097320 Brassica oleracea Bo8g097320 I
Bo9g014770 Brassica oleracea Bo9g014770 I
Bra004530 Brassica rapa Bra004530 I
Bra010048 Brassica rapa Bra010048 I
Bra013748 Brassica rapa Bra013748 I
Bra014419 Brassica rapa Bra014419 I
Bra019255 Brassica rapa Bra019255 I
Bra035910 Brassica rapa Bra035910 I
PK02218.1 Cannabis sativa PK02218.1 I
PK07332.1 Cannabis sativa PK07332.1 I
PK12669.1 Cannabis sativa PK12669.1 I
PK16974.1 Cannabis sativa PK16974.1 I
Cagra.0050s0046 Capsella grandiflora Cagra.0050s0046 I
Cagra.0483s0062 Capsella grandiflora Cagra.0483s0062 I
Cagra.4553s0009 Capsella grandiflora Cagra.4553s0009 I
Carubv10018954m.g Capsella rubella Carubv10018954m.g I
Carubv10022841m.g Capsella rubella Carubv10022841m.g I
Carubv10025860m.g Capsella rubella Carubv10025860m.g I
evm.TU.contig_31756 Carica papaya evm.TU.contig_31756 I
evm.TU.supercontig_15.1 Carica papaya evm.TU.supercontig_15.1 I
evm.TU.supercontig_96.40 Carica papaya evm.TU.supercontig_96.40 I
Ca_05681 Cicer arietinum Ca_05681 I
Ca_21948 Cicer arietinum Ca_21948 I
Ca_23296 Cicer arietinum Ca_23296 I
Cla011540 Citrullus lanatus Cla011540 I
Cla013021 Citrullus lanatus Cla013021 I
Cla019614 Citrullus lanatus Cla019614 I
Ciclev10019131m.g Citrus clementina Ciclev10019131m.g I
Ciclev10019174m.g Citrus clementina Ciclev10019174m.g I
Ciclev10030696m.g Citrus clementina Ciclev10030696m.g I
orange1.1g004792m.g Citrus sinensis orange1.1g004792m.g I
orange1.1g005368m.g Citrus sinensis orange1.1g005368m.g I
orange1.1g005491m.g Citrus sinensis orange1.1g005491m.g I
Cucsa.078800 Cucumis sativus Cucsa.078800 I
Cucsa.114840 Cucumis sativus Cucsa.114840 I
Cucsa.156920 Cucumis sativus Cucsa.156920 I
Cucsa.303990 Cucumis sativus Cucsa.303990 I
Eucgr.D01764 Eucalyptus grandis Eucgr.D01764 I
Eucgr.E00888 Eucalyptus grandis Eucgr.E00888 I
Thhalv10001365m.g Eutrema salsugineum Thhalv10001365m.g I
Thhalv10003641m.g Eutrema salsugineum Thhalv10003641m.g I
Thhalv10005857m.g Eutrema salsugineum Thhalv10005857m.g I
Thhalv10024554m.g Eutrema salsugineum Thhalv10024554m.g I
gene06434-v1.0-hybrid Fragaria vesca gene06434-v1.0-hybrid I
gene19138-v1.0-hybrid Fragaria vesca gene19138-v1.0-hybrid I
gene25123-v1.0-hybrid Fragaria vesca gene25123-v1.0-hybrid I
GLYMA01G25270 Glycine max GLYMA01G25270 I
GLYMA03G17450 Glycine max GLYMA03G17450 I
GLYMA03G41920 Glycine max GLYMA03G41920 I
GLYMA04G37760 Glycine max GLYMA04G37760 I
GLYMA05G38540 Glycine max GLYMA05G38540 I
GLYMA06G17320 Glycine max GLYMA06G17320 I
GLYMA07G06060 Glycine max GLYMA07G06060 I
GLYMA07G16170 Glycine max GLYMA07G16170 I
GLYMA08G01100 Glycine max GLYMA08G01100 I
GLYMA16G00220 Glycine max GLYMA16G00220 I
GLYMA16G02650 Glycine max GLYMA16G02650 I
GLYMA18G40180 Glycine max GLYMA18G40180 I
Gorai.001G054600 Gossypium raimondii Gorai.001G054600 I
Gorai.001G153900 Gossypium raimondii Gorai.001G153900 I
Gorai.003G078000 Gossypium raimondii Gorai.003G078000 I
Gorai.007G026900 Gossypium raimondii Gorai.007G026900 I
Gorai.007G109500 Gossypium raimondii Gorai.007G109500 I
Gorai.008G126200 Gossypium raimondii Gorai.008G126200 I
Gorai.008G210200 Gossypium raimondii Gorai.008G210200 I
MLOC_64596 Hordeum vulgare MLOC_64596 I
LPERR11G11950 Leersia perrieri LPERR11G11950 I
LPERR12G09930 Leersia perrieri LPERR12G09930 I
Lus10023058.g Linum usitatissimum Lus10023058.g I
Lus10032413.g Linum usitatissimum Lus10032413.g I
Lus10032541.g Linum usitatissimum Lus10032541.g I
Lus10043200.g Linum usitatissimum Lus10043200.g I
chr1.LjT43L07.10.nd Lotus japonicus chr1.LjT43L07.10.nd I
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I
LjSGA_022281.1 Lotus japonicus LjSGA_022281.1 I
LjSGA_059323.1 Lotus japonicus LjSGA_059323.1 I
LjSGA_068216.1 Lotus japonicus LjSGA_068216.1 I
MDP0000139073 Malus domestica MDP0000139073 I
MDP0000194603 Malus domestica MDP0000194603 I
MDP0000258032 Malus domestica MDP0000258032 I
MDP0000310875 Malus domestica MDP0000310875 I
MDP0000929655 Malus domestica MDP0000929655 I
cassava17839.valid.m1 Manihot esculenta cassava17839.valid.m1 I
cassava17840.valid.m1 Manihot esculenta cassava17840.valid.m1 I
cassava29828.valid.m1 Manihot esculenta cassava29828.valid.m1 I
cassava37256.valid.m1 Manihot esculenta cassava37256.valid.m1 I
cassava42787.valid.m1 Manihot esculenta cassava42787.valid.m1 I
cassava42788.valid.m1 Manihot esculenta cassava42788.valid.m1 I
cassava42789.valid.m1 Manihot esculenta cassava42789.valid.m1 I
cassava43609.valid.m1 Manihot esculenta cassava43609.valid.m1 I
cassava45422.m1 Manihot esculenta cassava45422.m1 I
cassava45423.m1 Manihot esculenta cassava45423.m1 I
cassava45424.m1 Manihot esculenta cassava45424.m1 I
cassava45425.m1 Manihot esculenta cassava45425.m1 I
cassava45426.m1 Manihot esculenta cassava45426.m1 I
MTR_2g005240 Medicago truncatula MTR_2g005240 I
MTR_4g021580 Medicago truncatula MTR_4g021580 I
MTR_7g062540 Medicago truncatula MTR_7g062540 I
MTR_8g100050 Medicago truncatula MTR_8g100050 I
mgf005549m Mimulus guttatus mgf005549m I
mgf006511m Mimulus guttatus mgf006511m I
mgf015308m Mimulus guttatus mgf015308m I
mgf020855m Mimulus guttatus mgf020855m I
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I
GSMUA_Achr10G15100_001 Musa acuminata GSMUA_Achr10G15100_001 I
GSMUA_Achr6G07390_001 Musa acuminata GSMUA_Achr6G07390_001 I
GSMUA_Achr6G08090_001 Musa acuminata GSMUA_Achr6G08090_001 I
GSMUA_Achr7G24330_001 Musa acuminata GSMUA_Achr7G24330_001 I
GSMUA_Achr9G08310_001 Musa acuminata GSMUA_Achr9G08310_001 I
GSMUA_AchrUn_randomG11300_001 Musa acuminata GSMUA_AchrUn_randomG11300_001 I
OBART11G15270 Oryza barthii OBART11G15270 I
OB02G28170 Oryza brachyantha OB02G28170 I
OB11G21910 Oryza brachyantha OB11G21910 I
OB12G20020 Oryza brachyantha OB12G20020 I
ORGLA11G0129300 Oryza glaberrima ORGLA11G0129300 I
OGLUM01G46840 Oryza glumaepatula OGLUM01G46840 I
OGLUM11G14710 Oryza glumaepatula OGLUM11G14710 I
ARF23 Oryza indica BGIOSGA033901 I
OLONG_022378 Oryza longistaminata OLONG_022378 I
OMERI11G12590 Oryza meridionalis OMERI11G12590 I
ONIVA12G10760 Oryza nivara ONIVA12G10760 I
OPUNC01G41560 Oryza punctata OPUNC01G41560 I
OPUNC04G11520 Oryza punctata OPUNC04G11520 I
OPUNC11G12650 Oryza punctata OPUNC11G12650 I
ORUFI11G16290 Oryza rufipogon ORUFI11G16290 I
OS11G0523800 Oryza sativa OS11G0523800 I
Pavir.Aa01676 Panicum virgatum Pavir.Aa01676 I
Pavir.Ab01961 Panicum virgatum Pavir.Ab01961 I
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I
Pavir.J11622 Panicum virgatum Pavir.J11622 I
PDK_20s1394651g001 Phoenix dactylifera PDK_20s1394651g001 I
PDK_20s1477241g001 Phoenix dactylifera PDK_20s1477241g001 I
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I
POPTR_0001s10900 Populus trichocarpa POPTR_0001s10900 I
POPTR_0002s17350 Populus trichocarpa POPTR_0002s17350 I
POPTR_0003s14200 Populus trichocarpa POPTR_0003s14200 I
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I
POPTR_0012s10790 Populus trichocarpa POPTR_0012s10790 I
POPTR_0014s09560 Populus trichocarpa POPTR_0014s09560 I
POPTR_0015s11660 Populus trichocarpa POPTR_0015s11660 I
Pm018352 Prunus mume Pm018352 I
Pm024149 Prunus mume Pm024149 I
Pm024588 Prunus mume Pm024588 I
PRUPE_ppa001392mg Prunus persica PRUPE_ppa001392mg I
PRUPE_ppa002230mg Prunus persica PRUPE_ppa002230mg I
PRUPE_ppa002617mg Prunus persica PRUPE_ppa002617mg I
30068.m002516 Ricinus communis 30068.m002516 I
SapurV1A.0003s1010 Salix purpurea SapurV1A.0003s1010 I
SapurV1A.0013s0230 Salix purpurea SapurV1A.0013s0230 I
SapurV1A.0035s0230 Salix purpurea SapurV1A.0035s0230 I
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I
SapurV1A.0774s0040 Salix purpurea SapurV1A.0774s0040 I
SapurV1A.1529s0070 Salix purpurea SapurV1A.1529s0070 I
Si000340m.g Setaria italica Si000340m.g I
Si016562m.g Setaria italica Si016562m.g I
Si021216m.g Setaria italica Si021216m.g I
Solyc01g096070.2 Solanum lycopersicum Solyc01g096070.2 I
Solyc03g118290.2 Solanum lycopersicum Solyc03g118290.2 I
Solyc08g008380.2 Solanum lycopersicum Solyc08g008380.2 I
Solyc12g042070.1 Solanum lycopersicum Solyc12g042070.1 I
PGSC0003DMG400000118 Solanum tuberosum PGSC0003DMG400000118 I
PGSC0003DMG400012261 Solanum tuberosum PGSC0003DMG400012261 I
PGSC0003DMG400014179 Solanum tuberosum PGSC0003DMG400014179 I
PGSC0003DMG400014452 Solanum tuberosum PGSC0003DMG400014452 I
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I
Sb03g044630 Sorghum bicolor Sb03g044630 I
Sb08g014320 Sorghum bicolor Sb08g014320 I
TCM_005126 Theobroma cacao TCM_005126 I
TCM_014743 Theobroma cacao TCM_014743 I
TCM_016500 Theobroma cacao TCM_016500 I
TCM_027113 Theobroma cacao TCM_027113 I
VIT_01s0244g00150 Vitis vinifera VIT_01s0244g00150 I
VIT_02s0025g01740 Vitis vinifera VIT_02s0025g01740 I
ARF1 Vitis vinifera VIT_12s0035g01800 I
VIT_15s0046g00290 Vitis vinifera VIT_15s0046g00290 I
ARF2 Vitis vinifera VIT_17s0000g00320 I
GRMZM2G006042 Zea mays GRMZM2G006042 I
GRMZM2G116557 Zea mays GRMZM2G116557 I
GRMZM2G137413 Zea mays GRMZM2G137413 I
GRMZM2G338259 Zea mays GRMZM2G338259 I
GRMZM2G352159 Zea mays GRMZM2G352159 I
GRMZM2G702026 Zea mays GRMZM2G702026 I