CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR09G09190
(
Leersia perrieri
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
LPERR09G09190
T241053_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSFB4
M06936_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFB4_col_a
0.453
0.713
HSFB2B
M06945_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_col_a
0.450
0.724
HSFB2B
M06946_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_colamp_a
0.450
0.724
HSFB3
M06937_2.00
Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY
Dap-seq
OMalley et al.(2016)
HSFB3_col_a
0.432
0.690
HSFB3
M06938_2.00
Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT
Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a
0.432
0.690
HSFB2A
M00869_2.00
Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN
PBM
Franco-Zorrilla et al.(2014)
HSFB2A
0.423
0.701
HSFB2A
M06952_2.00
Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF6_col_a
0.423
0.701
HSFC1
M00868_2.00
Arabidopsis thaliana
NDTCBNNN
NNNVGAHN
PBM
Franco-Zorrilla et al.(2014)
HSFC1
0.416
0.609
HSFC1
M06943_2.00
Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFC1_col_a
0.416
0.609
HSFC1
M06944_2.00
Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a
0.416
0.609
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.393
0.609
HSFA1E
M06939_2.00
Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_col_a
0.371
0.632
HSFA1E
M06940_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a
0.371
0.632
HSFA6B
M06941_2.00
Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a
0.360
0.655
HSFA6B
M06942_2.00
Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_col
0.360
0.655
HSFA6A
M06950_2.00
Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_col_a
0.356
0.575
HSFA6A
M06951_2.00
Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a
0.356
0.575
HSFA1B
M06948_2.00
Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF3_col_a
0.351
0.644
HSFA1B
M06949_2.00
Arabidopsis thaliana
TTCYRG
CYRGAA
Dap-seq
OMalley et al.(2016)
HSF3_colamp_a
0.351
0.644
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR09G09190.1
HSF
30
120
FLTKTHQMVEENATDEVISWGKEGRSFVVWKPVEFARDLLPLHFKHCNFSSFVRQLNTYGFRKVVPDRWEFANGNFRRGEQGLLSGIRRRK
Links
Other
HSF
family TFs
Other
Leersia perrieri
TFs
1406 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI000273
Acyrthosiphon pisum
ACYPI000273
I
AAEL012662
Aedes aegypti
AAEL012662
I
AARA009464
Anopheles arabiensis
AARA009464
I
AATE002862
Anopheles atroparvus
AATE002862
I
ACHR010105
Anopheles christyi
ACHR010105
I
ACOM040689
Anopheles coluzzii
ACOM040689
I
ACUA018540
Anopheles culicifacies
ACUA018540
I
ADIR000678
Anopheles dirus
ADIR000678
I
AEPI003166
Anopheles epiroticus
AEPI003166
I
AFAF012456
Anopheles farauti
AFAF012456
I
AFUN009249
Anopheles funestus
AFUN009249
I
AGAP028176
Anopheles gambiae
AGAP028176
I
AMEC020491
Anopheles melas
AMEC020491
I
AMEM000284
Anopheles merus
AMEM000284
I
AMIN001682
Anopheles minimus
AMIN001682
I
AQUA011502
Anopheles quadriannulatus
AQUA011502
I
ASIS012186
Anopheles sinensis
ASIS012186
I
ASTEI01901
Anopheles stephensi
ASTEI01901
I
GB44356
Apis mellifera
GB44356
I
GB47718
Apis mellifera
GB47718
I
BGLB006797
Biomphalaria glabrata
BGLB006797
I
BGIBMGA007303
Bombyx mori
BGIBMGA007303
I
estExt_fgenesh2_pg.C_2400032
Branchiostoma floridae
estExt_fgenesh2_pg.C_2400032
I
Cflo_09823--XP_001121050.1_APIME
Camponotus floridanus
Cflo_09823--XP_001121050.1_APIME
I
Cflo_05077--XP_624468.1_APIME
Camponotus floridanus
Cflo_05077--XP_624468.1_APIME
I
CapteG206308
Capitella teleta
CapteG206308
I
CLEC008492
Cimex lectularius
CLEC008492
I
CLEC012303
Cimex lectularius
CLEC012303
I
CGI_10020332
Crassostrea gigas
CGI_10020332
I
CpipJ_CPIJ010025
Culex pipiens
CpipJ_CPIJ010025
I
CPIJ010025
Culex quinquefasciatus
CPIJ010025
I
KGM_17543
Danaus plexippus
KGM_17543
I
YQE_07035
Dendroctonus ponderosae
YQE_07035
I
GF14327
Drosophila ananassae
FBgn0091354
I
GG21298
Drosophila erecta
FBgn0113477
I
GH13314
Drosophila grimshawi
FBgn0120790
I
dimm
Drosophila melanogaster
FBgn0023091
D
GI12220
Drosophila mojavensis
FBgn0134977
I
GL26661
Drosophila persimilis
FBgn0164242
I
GA21247
Drosophila pseudoobscura
FBgn0081235
I
GD24318
Drosophila simulans
FBgn0195665
I
GJ17849
Drosophila virilis
FBgn0205017
I
GK18738
Drosophila willistoni
FBgn0220736
I
GE12913
Drosophila yakuba
FBgn0230628
I
HHAL006119-PA
Halyomorpha halys
HHAL006119-PA
I
Hsal_02552--XP_001121050.1_APIME
Harpegnathos saltator
Hsal_02552--XP_001121050.1_APIME
I
Hsal_06132--XP_001121050.1_APIME
Harpegnathos saltator
Hsal_06132--XP_001121050.1_APIME
I
HMEL004962
Heliconius melpomene
HMEL004962
I
LDEC018804
Leptinotarsa decemlineata
LDEC018804
I
LotgiG98055
Lottia gigantea
LotgiG98055
I
LCUP013558
Lucilia cuprina
LCUP013558
I
MESCA005415
Megaselia scalaris
MESCA005415
I
MCINX009496
Melitaea cinxia
MCINX009496
I
MDOA007359
Musca domestica
MDOA007359
I
NV21702
Nasonia vitripennis
NV21702
I
NV10548
Nasonia vitripennis
NV10548
I
Ocbimv22004730m.g
Octopus bimaculoides
Ocbimv22004730m.g
I
PHUM567140
Pediculus humanus
PHUM567140
I
RPRC000986
Rhodnius prolixus
RPRC000986
I
Sakowv30016776m.g
Saccoglossus kowalevskii
Sakowv30016776m.g
I
SINV24225
Solenopsis invicta
SINV24225
I
SMAR011224
Strigamia maritima
SMAR011224
I
tetur09g04370
Tetranychus urticae
tetur09g04370
I
TC006222
Tribolium castaneum
TC006222
I
L798_12706
Zootermopsis nevadensis
L798_12706
I
L798_11629
Zootermopsis nevadensis
L798_11629
I