CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

MTR_5g017470 *(Medicago truncatula)* HSF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00447 (HSF_DNA-bind)	IPR000232	MTR_5g017470	T241284_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HSFB2B M06945_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_col_a	0.432	0.747
HSFB2B M06946_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_colamp_a	0.432	0.747
HSFB4 M06936_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFB4_col_a	0.425	0.724
HSFB2A M00869_2.00	Arabidopsis thaliana	NNNNNTTCB	VGAANNNNN	PBM Franco-Zorrilla et al.(2014) HSFB2A	0.417	0.713
HSFB2A M06952_2.00	Arabidopsis thaliana	GAANNTTCYAGA	TCTRGAANNTTC	Dap-seq OMalley et al.(2016) HSF6_col_a	0.417	0.713
HSFC1 M00868_2.00	Arabidopsis thaliana	NDTCBNNN	NNNVGAHN	PBM Franco-Zorrilla et al.(2014) HSFC1	0.405	0.632
HSFC1 M06943_2.00	Arabidopsis thaliana	GAASNTTCTAG	CTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFC1_col_a	0.405	0.632
HSFC1 M06944_2.00	Arabidopsis thaliana	RGAASNTTCTAGAANVW	WBNTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFC1_colamp_a	0.405	0.632
HSFA4A M06947_2.00	Arabidopsis thaliana	NNNRGAABBTTCTAGAANN	NNTTCTAGAAVVTTCYNNN	Dap-seq OMalley et al.(2016) HSF21_col_a	0.403	0.632
HSFA1E M06939_2.00	Arabidopsis thaliana	RGAANNTTCTAGA	TCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSFA1E_col_a	0.389	0.690
HSFA1E M06940_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA1E_colamp_a	0.389	0.690
HSFB3 M06937_2.00	Arabidopsis thaliana	RRAANMWTCTAGAAV	BTTCTAGAWKNTTYY	Dap-seq OMalley et al.(2016) HSFB3_col_a	0.384	0.644
HSFB3 M06938_2.00	Arabidopsis thaliana	AABSTTCTAGAAN	NTTCTAGAASVTT	Dap-seq OMalley et al.(2016) HSFB3_colamp_a	0.384	0.644
HSFA1B M06948_2.00	Arabidopsis thaliana	GAANNTTCTAGA	TCTAGAANNTTC	Dap-seq OMalley et al.(2016) HSF3_col_a	0.371	0.678
HSFA1B M06949_2.00	Arabidopsis thaliana	TTCYRG	CYRGAA	Dap-seq OMalley et al.(2016) HSF3_colamp_a	0.371	0.678
HSFA6B M06941_2.00	Arabidopsis thaliana	RGAASNTTCTAGA	TCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA6B_colamp_a	0.370	0.644
HSFA6B M06942_2.00	Arabidopsis thaliana	RGAABNTTCTRGAAN	NTTCYAGAANVTTCY	Dap-seq OMalley et al.(2016) HSFA6B_col	0.370	0.644
HSFA6A M06950_2.00	Arabidopsis thaliana	GAASNTTCTAGAANNW	WNNTTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_col_a	0.360	0.575
HSFA6A M06951_2.00	Arabidopsis thaliana	GAASNTTCTAGAA	TTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_colamp_a	0.360	0.575
For this family, TFs with SR scores > 0.318* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
AES94709	HSF	10	100	FLLKTYQMVDDLATDDVISWSESGESFVVWKHADFARDLLPKYFKHNNFSSFVRQLNTYGFRKLVPDKWEFSNENFKRNHKHLLTDIKRRK

Links
Other HSF family TFs
Other *Medicago truncatula* TFs

1471 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
e_gw1.00153.103.1	Aspergillus carbonarius	e_gw1.00153.103.1	N
e_gw1.00162.87.1	Aspergillus carbonarius	e_gw1.00162.87.1	N
fgenesh1_pg.00129_#_521	Aspergillus carbonarius	fgenesh1_pg.00129_#_521	I
fgenesh1_pm.00153_#_158	Aspergillus carbonarius	fgenesh1_pm.00153_#_158	I
fgenesh1_pm.00168_#_452	Aspergillus carbonarius	fgenesh1_pm.00168_#_452	I
fgenesh1_pm.00815_#_87	Aspergillus carbonarius	fgenesh1_pm.00815_#_87	I
fgenesh1_pm.00855_#_253	Aspergillus carbonarius	fgenesh1_pm.00855_#_253	I
ACLA_002790	Aspergillus clavatus	CADACLAG00000095	I
CADAFLAG00010229	Aspergillus flavus	CADAFLAG00010229	I
CADAFLAG00009480	Aspergillus flavus	CADAFLAG00009480	I
CADAFLAG00012923	Aspergillus flavus	CADAFLAG00012923	N
CADAFLAG00005228	Aspergillus flavus	CADAFLAG00005228	N
ANIA_11222	Aspergillus nidulans	CADANIAG00001045	D
CADANGAG00012263	Aspergillus niger	CADANGAG00012263	I
CADANGAG00002855	Aspergillus niger	CADANGAG00002855	N
CADANGAG00007590	Aspergillus niger	CADANGAG00007590	I
CADANGAG00008033	Aspergillus niger	CADANGAG00008033	I
CADANGAG00012401	Aspergillus niger	CADANGAG00012401	I
CADAORAG00009408	Aspergillus oryzae	CADAORAG00009408	I
CADAORAG00008182	Aspergillus oryzae	CADAORAG00008182	N
A1O3_06292	Capronia epimyces	A1O3_06292	I
CFIO01_03642	Colletotrichum fioriniae	CFIO01_03642	I
CGGC5_6497	Colletotrichum gloeosporioides	CGGC5_6497	I
CCM_09227	Cordyceps militaris	CCM_09227	I
HMPREF1541_09393	Cyphellophora europaea	HMPREF1541_09393	N
HMPREF1541_04026	Cyphellophora europaea	HMPREF1541_04026	N
PV05_02316	Exophiala xenobiotica	PV05_02316	N
OIDMADRAFT_204080	Oidiodendron maius	OIDMADRAFT_204080	I
Pc20g09530	Penicillium chrysogenum	Pc20g09530	N
PMAA_058100	Penicillium marneffei	PMAA_058100	N
PMAA_073800	Penicillium marneffei	PMAA_073800	N
PCH_Pc20g09530	Penicillium rubens	PCH_Pc20g09530	N
SPBR_02468	Sporothrix brasiliensis	SPBR_02468	N
S40288_04988	Stachybotrys chartarum	S40288_04988	I
PMAA_073800	Talaromyces marneffei	PMAA_073800	N
PMAA_058100	Talaromyces marneffei	PMAA_058100	N
TSTA_098680	Talaromyces stipitatus	TSTA_098680	N
THITE_2132051	Thielavia terrestris	THITE_2132051	I

MTR_5g017470 (Medicago truncatula) HSF

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1471 Related TFs

MTR_5g017470 **(Medicago truncatula)
HSF**