Pm009237 (Prunus mume)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Pm009237 T242638_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.532 0.828
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.532 0.828
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.467 0.747
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.467 0.747
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.465 0.770
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.465 0.770
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.445 0.701
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.441 0.747
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.441 0.747
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.404 0.701
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.404 0.701
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.404 0.701
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.403 0.678
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.377 0.621
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.377 0.621
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.368 0.632
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.368 0.632
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.343 0.598
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.343 0.598
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm009237 HSF 34 124

Links

Other HSF family TFs
Other Prunus mume TFs

1419 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF287 Callithrix jacchus ENSCJAG00000011933 I
ZNF287 Canis familiaris ENSCAFG00000017966 I
ENSCPOG00000011595 Cavia porcellus ENSCPOG00000011595 I
ENSCSAG00000008835 Chlorocebus sabaeus ENSCSAG00000008835 I
ZNF287 Choloepus hoffmanni ENSCHOG00000011118 I
ZNF287 Dasypus novemcinctus ENSDNOG00000016902 I
Zfp287 Dipodomys ordii ENSDORG00000009473 I
ZNF287 Echinops telfairi ENSETEG00000008692 I
ZNF287 Equus caballus ENSECAG00000003319 I
ENSEEUG00000003272 Erinaceus europaeus ENSEEUG00000003272 I
ENSGGOG00000022969 Gorilla gorilla ENSGGOG00000022969 I
ZNF287 Homo sapiens ENSG00000141040 D
ENSSTOG00000015214 Ictidomys tridecemlineatus ENSSTOG00000015214 I
ZNF287 Loxodonta africana ENSLAFG00000016502 I
ENSP00000379169 Macaca fascicularis ENSP00000379169 I
ZNF287 Macaca mulatta ENSMMUG00000016723 I
ENSMPUG00000010118 Mustela putorius furo ENSMPUG00000010118 I
Zfp287 Mus musculus ENSMUSG00000005267 I
Myotis_brandtii_ZNF287_10023285 Myotis brandtii Myotis_brandtii_ZNF287_10023285 I
ENSNLEG00000014695 Nomascus leucogenys ENSNLEG00000014695 I
ZNF287 Ochotona princeps ENSOPRG00000017300 I
ENSOCUG00000009359 Oryctolagus cuniculus ENSOCUG00000009359 I
ENSOARG00000016845 Ovis aries ENSOARG00000016845 I
ENSPTRG00000008815 Pan troglodytes ENSPTRG00000008815 I
ENSPANG00000023719 Papio anubis ENSPANG00000023719 I
ENSPPYG00000008021 Pongo abelii ENSPPYG00000008021 I
ENSPCAG00000005147 Procavia capensis ENSPCAG00000005147 I
ENSPVAG00000004670 Pteropus vampyrus ENSPVAG00000004670 I
Zfp287 Rattus norvegicus ENSRNOG00000003215 I
ENSSARG00000012225 Sorex araneus ENSSARG00000012225 I
ZNF287 Sus scrofa ENSSSCG00000018031 I
ENSTBEG00000009446 Tupaia belangeri ENSTBEG00000009446 I
ENSVPAG00000009838 Vicugna pacos ENSVPAG00000009838 I