CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.206000
(
Cucumis sativus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
Cucsa.206000
T242757_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSFB2B
M06945_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_col_a
0.544
0.920
HSFB2B
M06946_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_colamp_a
0.544
0.920
HSFB2A
M00869_2.00
Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN
PBM
Franco-Zorrilla et al.(2014)
HSFB2A
0.473
0.805
HSFB2A
M06952_2.00
Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF6_col_a
0.473
0.805
HSFB4
M06936_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFB4_col_a
0.458
0.782
HSFB3
M06937_2.00
Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY
Dap-seq
OMalley et al.(2016)
HSFB3_col_a
0.449
0.690
HSFB3
M06938_2.00
Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT
Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a
0.449
0.690
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.406
0.644
HSFC1
M00868_2.00
Arabidopsis thaliana
NDTCBNNN
NNNVGAHN
PBM
Franco-Zorrilla et al.(2014)
HSFC1
0.402
0.644
HSFC1
M06943_2.00
Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFC1_col_a
0.402
0.644
HSFC1
M06944_2.00
Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a
0.402
0.644
HSFA1E
M06939_2.00
Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_col_a
0.392
0.667
HSFA1E
M06940_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a
0.392
0.667
HSFA6A
M06950_2.00
Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_col_a
0.383
0.621
HSFA6A
M06951_2.00
Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a
0.383
0.621
HSFA6B
M06941_2.00
Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a
0.375
0.655
HSFA6B
M06942_2.00
Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_col
0.375
0.655
HSFA1B
M06948_2.00
Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF3_col_a
0.371
0.655
HSFA1B
M06949_2.00
Arabidopsis thaliana
TTCYRG
CYRGAA
Dap-seq
OMalley et al.(2016)
HSF3_colamp_a
0.371
0.655
HSF1
M03329_2.00
Homo sapiens
GAANVTTCBVGAA
TTCBVGAABNTTC
SELEX
Jolma et al.(2013)
HSF1_1
0.342
0.563
HSF1
M03330_2.00
Homo sapiens
GAANRTTCBAGAA
TTCTVGAAYNTTC
SELEX
Jolma et al.(2013)
HSF1_2
0.342
0.563
HSF1
M05523_2.00
Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB
SELEX
Yin et al.(2017)
HSF1_eDBD_HT-SELEX
0.342
0.563
HSF1
M05525_2.00
Homo sapiens
VGAANRTTCKVGAAN
NTTCBMGAAYNTTCB
SELEX
Yin et al.(2017)
HSF1_FL_HT-SELEX
0.342
0.563
HSF1
M07977_2.00
Homo sapiens
GDCSYGGGTTCRADYCCC
GGGRHTYGAACCCRSGHC
ChIP-seq
Gerstein et al.(2012)
HepG2_HSF1_Stanford
0.342
0.563
HSF1
M09230_2.00
Homo sapiens
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN
Misc
Kulakovskiy et al.(2013)
HSF1_HUMAN.H11MO.0.A
0.342
0.563
Hsf1
M09232_2.00
Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN
Misc
Kulakovskiy et al.(2013)
HSF1_MOUSE.H11MO.0.A
0.342
0.563
HSF1
M09592_2.00
Homo sapiens
NNBBCYRGAANNTTCYRGVV
BBCYRGAANNTTCYRGVVNN
Misc
Heinz et al.(2010)
HepG2-HSF1_GSE31477
0.342
0.563
Hsf1
M09593_2.00
Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN
Misc
Heinz et al.(2010)
Striatum-HSF1_GSE38000
0.342
0.563
HSF1
M10863_2.00
Homo sapiens
NGAAHNTTCY
RGAANDTTCN
Transfac
Matys et al.(2006)
V$HSF1_01
0.342
0.563
HSF1
M10864_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q5_01
0.342
0.563
HSF1
M10865_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q5
0.342
0.563
HSF1
M10866_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q6_01
0.342
0.563
HSF1
M10867_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q6
0.342
0.563
HSF1
M10868_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF_Q6
0.342
0.563
HSF1
M05524_2.00
Homo sapiens
RGAANRTTCYRGAWN
NWTCYRGAAYNTTCY
SELEX
Yin et al.(2017)
HSF1_eDBD_Methyl-HT-SELEX
0.342
0.563
HSF1
M05526_2.00
Homo sapiens
RGAANVTTCYRGAWN
NWTCYRGAABNTTCY
SELEX
Yin et al.(2017)
HSF1_FL_Methyl-HT-SELEX
0.342
0.563
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.206000.1
HSF
25
115
FLTKTYQLVDDPAVDDLISWNEDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRKGEKGLLRDIQRRK
Links
Other
HSF
family TFs
Other
Cucumis sativus
TFs
1476 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_06070
Arthroderma benhamiae
ARB_06070
N
AGOS_AFR136C
Ashbya gossypii
AGOS_AFR136C
I
BDDG_07871
Blastomyces dermatitidis
BDDG_07871
N
AWRI1499_0492
Brettanomyces bruxellensis
AWRI1499_0492
N
CaO19.8085
Candida albicans
CaO19.8085
I
CaO19.11452
Candida albicans
CaO19.11452
N
CaO19.3969
Candida albicans
CaO19.3969
N
CaO19.454
Candida albicans
CaO19.454
I
CD36_31370
Candida dubliniensis
CD36_31370
N
CD36_54430
Candida dubliniensis
CD36_54430
N
CAGL0F08195g
Candida glabrata
CAGL0F08195g
N
PGUG_04779
Candida guilliermondii
PGUG_04779
I
PGUG_03027
Candida guilliermondii
PGUG_03027
N
CLUG_03610
Candida lusitaniae
CLUG_03610
I
CLUG_01812
Candida lusitaniae
CLUG_01812
N
G210_0510
Candida maltosa
G210_0510
I
G210_1597
Candida maltosa
G210_1597
N
CORT_0F01150
Candida orthopsilosis
CORT_0F01150
N
CPAG_02000
Candida parapsilosis
CPAG_02000
N
CPAG_04153
Candida parapsilosis
CPAG_04153
N
CANTEDRAFT_132848
Candida tenuis
CANTEDRAFT_132848
I
CTRG_06093
Candida tropicalis
CTRG_06093
I
CTRG_00655
Candida tropicalis
CTRG_00655
I
A1O1_04043
Capronia coronata
A1O1_04043
N
A1O3_01459
Capronia epimyces
A1O3_01459
N
PV04_05986
Capronia semiimmersa
PV04_05986
N
Z519_07578
Cladophialophora bantiana
Z519_07578
N
PV07_04143
Cladophialophora immunda
PV07_04143
N
A1O5_07765
Cladophialophora psammophila
A1O5_07765
N
A1O7_05617
Cladophialophora yegresii
A1O7_05617
N
CLUG_01812
Clavispora lusitaniae
CLUG_01812
N
CLUG_03610
Clavispora lusitaniae
CLUG_03610
I
CIMG_08549
Coccidioides immitis
CIMG_08549
N
CPC735_062070
Coccidioides posadasii
CPC735_062070
N
DEHA2G10560g
Debaryomyces hansenii
DEHA2G10560g
I
DEHA2G20636g
Debaryomyces hansenii
DEHA2G20636g
I
Ecym_2312
Eremothecium cymbalariae
Ecym_2312
I
EV44_g0556
Erysiphe necator
EV44_g0556
N
A1O9_03914
Exophiala aquamarina
A1O9_03914
N
HMPREF1120_08552
Exophiala dermatitidis
HMPREF1120_08552
N
PV10_07698
Exophiala mesophila
PV10_07698
N
PV06_00857
Exophiala oligosperma
PV06_00857
N
PV11_00595
Exophiala sideris
PV11_00595
N
PV08_00880
Exophiala spinifera
PV08_00880
N
PV05_05603
Exophiala xenobiotica
PV05_05603
N
Z517_00530
Fonsecaea pedrosoi
Z517_00530
N
HCBG_08291
Histoplasma capsulatum
HCBG_08291
N
KNAG_0K00470
Kazachstania naganishii
KNAG_0K00470
N
KLLA0_E03191g
Kluyveromyces lactis
KLLA0_E03191g
I
KLTH0F14982g
Kluyveromyces thermotolerans
KLTH0F14982g
I
KLTH0H00814g
Kluyveromyces thermotolerans
KLTH0H00814g
I
Kwal_21254
Kluyveromyces waltii
Kwal_21254
I
PAS_chr2-1_0404
Komagataella pastoris
PAS_chr2-1_0404
N
KUCA_T00005514001
Kuraishia capsulata
KUCA_T00005514001
N
SAKL0G03586g
Lachancea kluyveri
SAKL0G03586g
I
KLTH0H00814g
Lachancea thermotolerans
KLTH0H00814g
I
KLTH0F14982g
Lachancea thermotolerans
KLTH0F14982g
I
LELG_03188
Lodderomyces elongisporus
LELG_03188
N
LELG_04038
Lodderomyces elongisporus
LELG_04038
N
PGUG_04779
Meyerozyma guilliermondii
PGUG_04779
I
PGUG_03027
Meyerozyma guilliermondii
PGUG_03027
N
MCYG_02334
Microsporum canis
MCYG_02334
N
MGYG_07335
Microsporum gypseum
MGYG_07335
N
GNLVRS01_PISO0A02134g
Millerozyma farinosa
GNLVRS01_PISO0A02134g
N
GNLVRS01_PISO0B02289g
Millerozyma farinosa
GNLVRS01_PISO0B02289g
N
GNLVRS01_PISO0F09091g
Millerozyma farinosa
GNLVRS01_PISO0F09091g
I
GNLVRS01_PISO0E07748g
Millerozyma farinosa
GNLVRS01_PISO0E07748g
I
NCAS_0H02280
Naumovozyma castellii
NCAS_0H02280
I
NDAI_0C01380
Naumovozyma dairenensis
NDAI_0C01380
I
hsf-2
Neurospora crassa
NCU08480
N
estExt_fgenesh2_pg.C_100130
Neurospora discreta
estExt_fgenesh2_pg.C_100130
N
HPODL_00777
Ogataea parapolymorpha
HPODL_00777
I
PABG_01939
Paracoccidioides brasiliensis
PABG_01939
N
PAAG_01459
Paracoccidioides sp lutzii
PAAG_01459
N
SNOG_08309
Phaeosphaeria nodorum
SNOG_08309
I
JL09_g3802
Pichia kudriavzevii
JL09_g3802
N
XP_002491305.1
Pichia pastoris
XP_002491305.1
N
estExt_fgenesh1_pg.C_chr_2.10346
Pichia stipitis
estExt_fgenesh1_pg.C_chr_2.10346
N
estExt_fgenesh1_pg.C_chr_6.10474
Pichia stipitis
estExt_fgenesh1_pg.C_chr_6.10474
I
PredSwiss_ASS2010_3259.1
Pneumocystis carinii
PredSwiss_ASS2010_3259.1
I
PredSwiss_CON2839.2
Pneumocystis carinii
PredSwiss_CON2839.2
I
PredSwiss_EST948.1
Pneumocystis carinii
PredSwiss_EST948.1
I
Z518_08730
Rhinocladiella mackenziei
Z518_08730
N
23912_Multiple
Saccharomyces bayanus
23912_Multiple
I
Scas_Contig714.29
Saccharomyces castellii
Scas_Contig714.29
I
AACERI_AaceriAFR136C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFR136C
I
PICST_68146
Scheffersomyces stipitis
PICST_68146
I
SJAG_04388
Schizosaccharomyces japonicus
SJAG_04388
I
SMAC_00003
Sordaria macrospora
SMAC_00003
N
TPHA_0H01130
Tetrapisispora phaffii
TPHA_0H01130
I
H101_00214
Trichophyton interdigitale
H101_00214
N
TESG_06359
Trichophyton tonsurans
TESG_06359
N
TRV_00290
Trichophyton verrucosum
TRV_00290
N
Kpol_1062p8
Vanderwaltozyma polyspora
Kpol_1062p8
I
BN7_4359
Wickerhamomyces ciferrii
BN7_4359
N
BN7_3380
Wickerhamomyces ciferrii
BN7_3380
I
ZBAI_07702
Zygosaccharomyces bailii
ZBAI_07702
I