CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNAPOd2T00019440001
(
Oikopleura dioica
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
SNAPOd2T00019440001
T243492_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
hsf-1
M00682_2.00
Caenorhabditis elegans
TTCYAGAA
TTCTRGAA
PBM
Narasimhan et al.(2015)
pTH10796
0.332
0.469
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNAPOd2T00019440001
HSF
41
141
FLTKLWQLVNEGDPDLVGWSENGKSFIVKDQNLFAKRVLPNFFKHQKMNSFVRQLNMYGFKKVPKMTEGTLHTVDYEMIEFQNELFVRGKSELIGKIRRKD
Links
Other
HSF
family TFs
Other
Oikopleura dioica
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PEQ_0000030201
Parascaris equorum
PEQ_0000030201
N