txndc15 (Tetraodon nigroviridis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSTNIG00000019636 T244427_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf2
M00805_2.00 		Mus musculus
NDWNHGAAAV
BTTTCDNWHN		 PBM
Weirauch et al.(2013)
pTH2835 		0.702 0.702
IRF2
M05545_2.00 		Homo sapiens
NGAAAVYGAAAS
STTTCRBTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX 		0.702 0.702
IRF2
M02691_2.00 		Homo sapiens
SGAAAGYGAAASYNWWHH
DDWWNRSTTTCRCTTTCS		 SELEX
Mathelier et al.(2014)
MA0051.1 		0.702 0.702
IRF2
M09237_2.00 		Homo sapiens
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A 		0.702 0.702
Irf2
M09245_2.00 		Mus musculus
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B 		0.702 0.702
IRF2
M09596_2.00 		Homo sapiens
NRAAVNRRAASB
VSTTYYNBTTYN		 Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985 		0.702 0.702
IRF2
M10892_2.00 		Homo sapiens
GAAAAGYGAAASY
RSTTTCRCTTTTC		 Transfac
Matys et al.(2006)
V$IRF2_01 		0.702 0.702
IRF2
M10893_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF2_Q6 		0.702 0.702
IRF2
M05546_2.00 		Homo sapiens
NGAAASYGAAAS
STTTCRSTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX 		0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000003863 IRF 7 111
ENSTNIP00000022879 IRF 7 111

Links

Other IRF family TFs
Other Tetraodon nigroviridis TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
IRF1 Anolis carolinensis ENSACAG00000012699 I 0.702
Afo_R013359 Aptenodytes forsteri Afo_R013359 I 0.712
ENSAMXG00000010595 Astyanax mexicanus ENSAMXG00000010595 I 0.733
Aan_R004209 Calypte anna Aan_R004209 I 0.705
txndc15 Danio rerio ENSDARG00000043249 I 0.743
IRF2 Equus caballus ENSECAG00000007508 I 0.702
txndc15 Gasterosteus aculeatus ENSGACG00000020876 I 0.731
ENSLOCG00000010331 Lepisosteus oculatus ENSLOCG00000010331 I 0.705
ENSLOCG00000013738 Lepisosteus oculatus ENSLOCG00000013738 I 0.702
IRF2 Meleagris gallopavo ENSMGAG00000006359 I 0.705
ENSONIG00000017217 Oreochromis niloticus ENSONIG00000017217 I 0.798
txndc15 Oryzias latipes ENSORLG00000001131 I 0.740
IRF2 Pan troglodytes ENSPTRG00000016639 I 0.705
Irf2 Rattus norvegicus ENSRNOG00000009824 I 0.702
txndc15 Takifugu rubripes ENSTRUG00000004321 I 0.865
ENSTSYG00000003453 Tarsius syrichta ENSTSYG00000003453 I 0.727
ENSXMAG00000011087 Xiphophorus maculatus ENSXMAG00000011087 I 0.788