Afo_R014746 (Aptenodytes forsteri)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 Afo_R014746 T244505_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.990 0.990
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.990 0.990
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.990 0.990
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.990 0.990
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.990 0.990
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.990 0.990
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.990 0.990
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.990 0.990
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.990 0.990
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.990 0.990
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.990 0.990
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.981 0.981
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.981 0.981
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.800 0.800
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.800 0.800
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.800 0.800
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.800 0.800
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.800 0.800
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.800 0.800
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.800 0.800
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.800 0.800
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.800 0.800
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.800 0.800
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R014746 IRF 19 124

Links

Other IRF family TFs
Other Aptenodytes forsteri TFs

159 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002077 Ailuropoda melanoleuca ENSAMEG00000002077 I 0.000
ENSAPLG00000010379 Anas platyrhynchos ENSAPLG00000010379 I 0.000
Afo_R006000 Aptenodytes forsteri Afo_R006000 I 0.000
ENSAMXG00000002922 Astyanax mexicanus ENSAMXG00000002922 I 0.000
ENSP00000260045-D1 Bos grunniens ENSP00000260045-D1 I 0.000
THAP12 Bos taurus ENSBTAG00000031609 I 0.000
Brh_R010409 Buceros rhinoceros Brh_R010409 I 0.000
Cmyd_10020724 Chelonia mydas Cmyd_10020724 I 0.000
ENSCHOG00000007628 Choloepus hoffmanni ENSCHOG00000007628 I 0.000
ENSCHOG00000005539 Choloepus hoffmanni ENSCHOG00000005539 I 0.000
ENSCHOG00000009417 Choloepus hoffmanni ENSCHOG00000009417 I 0.000
ENSDNOG00000000774 Dasypus novemcinctus ENSDNOG00000000774 I 0.000
THAP12 Erinaceus europaeus ENSEEUG00000003060 I 0.000
THAP12 Felis catus ENSFCAG00000006764 I 0.000
THAP12 Gallus gallus ENSGALG00000000838 D 0.000
Gfo_R003337 Geospiza fortis Gfo_R003337 I 0.000
ENSP00000260045 Macaca fascicularis ENSP00000260045 I 0.000
ENSMMUG00000022399 Macaca mulatta ENSMMUG00000022399 I 0.000
ENSMEUG00000011765 Macropus eugenii ENSMEUG00000011765 I 0.000
THAP12 Meleagris gallopavo ENSMGAG00000015267 I 0.000
ENSMLUG00000000564 Myotis lucifugus ENSMLUG00000000564 I 0.000
THAP12 Ornithorhynchus anatinus ENSOANG00000000831 I 0.000
ENSOARG00000012702 Ovis aries ENSOARG00000012702 I 0.000
THAP12 Pan troglodytes ENSPTRG00000004091 I 0.000
Pvit_02386 Pogona vitticeps Pvit_02386 I 0.000
THAP12 Taeniopygia guttata ENSTGUG00000013565 I 0.000
ENSTSYG00000001778 Tarsius syrichta ENSTSYG00000001778 I 0.000
ENSTSYG00000000689 Tarsius syrichta ENSTSYG00000000689 I 0.000
THAP12 Tursiops truncatus ENSTTRG00000013287 I 0.000
ENSTTRG00000012793 Tursiops truncatus ENSTTRG00000012793 I 0.000
Tal_R010930 Tyto alba Tal_R010930 I 0.000
thap12 Xenopus tropicalis XB-GENE-6073216 I 0.000