ENSP00000268638-D1 (Bos grunniens)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 ENSP00000268638-D1 T244535_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.990 0.990
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.971 0.971
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.971 0.971
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.971 0.971
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.971 0.971
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.971 0.971
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.971 0.971
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.971 0.971
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.971 0.971
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.971 0.971
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		0.798 0.798
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		0.798 0.798
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		0.798 0.798
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		0.798 0.798
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		0.798 0.798
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		0.798 0.798
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		0.798 0.798
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		0.798 0.798
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		0.798 0.798
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		0.798 0.798
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		0.798 0.798
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		0.798 0.798
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		0.798 0.798
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000268638-D1 IRF 9 113

Links

Other IRF family TFs
Other Bos grunniens TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI005878 Acyrthosiphon pisum ACYPI005878 N 0.000
ACYPI29974 Acyrthosiphon pisum ACYPI29974 N 0.000
ACYPI34776 Acyrthosiphon pisum ACYPI34776 N 0.000
AAEL013408 Aedes aegypti AAEL013408 I 0.000
ENSAMEG00000010672 Ailuropoda melanoleuca ENSAMEG00000010672 I 0.000
Alligator_sinensis_CCG021031.1 Alligator sinensis Alligator_sinensis_CCG021031.1 I 0.000
ENSAPLG00000011215 Anas platyrhynchos ENSAPLG00000011215 I 0.000
DEAF1 Anolis carolinensis ENSACAG00000015102 I 0.000
AALB004583 Anopheles albimanus AALB004583 I 0.000
AARA003510 Anopheles arabiensis AARA003510 I 0.000
AATE015987 Anopheles atroparvus AATE015987 I 0.000
ACHR007416 Anopheles christyi ACHR007416 I 0.000
ACOM036369 Anopheles coluzzii ACOM036369 I 0.000
ACUA011008 Anopheles culicifacies ACUA011008 I 0.000
ADAC006957 Anopheles darlingi ADAC006957 I 0.000
ADIR001685 Anopheles dirus ADIR001685 I 0.000
AEPI005273 Anopheles epiroticus AEPI005273 I 0.000
AFAF013455 Anopheles farauti AFAF013455 I 0.000
AFUN005053 Anopheles funestus AFUN005053 I 0.000
AGAP004905 Anopheles gambiae AGAP004905 I 0.000
AMEC000569 Anopheles melas AMEC000569 I 0.000
AMEM010249 Anopheles merus AMEM010249 I 0.000
AMIN011402 Anopheles minimus AMIN011402 I 0.000
AQUA000322 Anopheles quadriannulatus AQUA000322 I 0.000
ASIS014192 Anopheles sinensis ASIS014192 I 0.000
ASTEI10643 Anopheles stephensi ASTEI10643 I 0.000
GB41654 Apis mellifera GB41654 I 0.000
Afo_R011879 Aptenodytes forsteri Afo_R011879 I 0.000
ACEP13992 Atta cephalotes ACEP13992 I 0.000
BGLB009094 Biomphalaria glabrata BGLB009094 I 0.000
BGIBMGA002019 Bombyx mori BGIBMGA002019 I 0.000
ENSP00000371846-D1 Bos grunniens ENSP00000371846-D1 I 0.000
fgenesh2_pg.scaffold_59000067 Branchiostoma floridae fgenesh2_pg.scaffold_59000067 I 0.000
fgenesh2_pg.scaffold_59000072 Branchiostoma floridae fgenesh2_pg.scaffold_59000072 I 0.000
DEAF1 Callithrix jacchus ENSCJAG00000011996 I 0.000
Aan_R010721 Calypte anna Aan_R010721 I 0.000
Cflo_07037--XP_395757.2_APIME Camponotus floridanus Cflo_07037--XP_395757.2_APIME I 0.000
DEAF1 Canis familiaris ENSCAFG00000006569 I 0.000
CapteG228571 Capitella teleta CapteG228571 I 0.000
DEAF1 Cavia porcellus ENSCPOG00000006073 I 0.000
Cmyd_10004045 Chelonia mydas Cmyd_10004045 I 0.000
ENSCSAG00000010763 Chlorocebus sabaeus ENSCSAG00000010763 I 0.000
CLEC001236 Cimex lectularius CLEC001236 I 0.000
CpipJ_CPIJ007045 Culex pipiens CpipJ_CPIJ007045 I 0.000
CPIJ007045 Culex quinquefasciatus CPIJ007045 I 0.000
KGM_18605 Danaus plexippus KGM_18605 I 0.000
DEAF1 Dasypus novemcinctus ENSDNOG00000000274 I 0.000
YQE_06816 Dendroctonus ponderosae YQE_06816 I 0.000
Deaf1 Dipodomys ordii ENSDORG00000015737 I 0.000
GF23595 Drosophila ananassae FBgn0100589 I 0.000
GG16060 Drosophila erecta FBgn0108295 I 0.000
GH14660 Drosophila grimshawi FBgn0122136 I 0.000
Deaf1 Drosophila melanogaster FBgn0013799 D 0.000
GI11644 Drosophila mojavensis FBgn0134404 I 0.000
GA21169 Drosophila pseudoobscura FBgn0081157 I 0.000
GM19656 Drosophila sechellia FBgn0174556 I 0.000
GD14830 Drosophila simulans FBgn0186503 I 0.000
GJ11325 Drosophila virilis FBgn0198585 I 0.000
GK16969 Drosophila willistoni FBgn0218968 I 0.000
GE19626 Drosophila yakuba FBgn0236964 I 0.000
GE23216 Drosophila yakuba FBgn0240415 I 0.000
DEAF1 Equus caballus ENSECAG00000010151 I 0.000
DEAF1 Felis catus ENSFCAG00000007591 I 0.000
ENSFALG00000010923 Ficedula albicollis ENSFALG00000010923 I 0.000
ENSGALG00000005089 Gallus gallus ENSGALG00000005089 I 0.000
Gfo_R011899 Geospiza fortis Gfo_R011899 I 0.000
DEAF1 Gorilla gorilla ENSGGOG00000014020 I 0.000
HHAL006904-PA Halyomorpha halys HHAL006904-PA I 0.000
Hsal_03559--XP_395757.2_APIME Harpegnathos saltator Hsal_03559--XP_395757.2_APIME I 0.000
HMEL013517 Heliconius melpomene HMEL013517 I 0.000
DEAF1 Homo sapiens ENSG00000177030 I 0.000
ENSSTOG00000004165 Ictidomys tridecemlineatus ENSSTOG00000004165 I 0.000
ISCW003915 Ixodes scapularis ISCW003915 I 0.000
ENSLOCG00000002360 Lepisosteus oculatus ENSLOCG00000002360 I 0.000
LDEC013410 Leptinotarsa decemlineata LDEC013410 I 0.000
DEAF1 Loxodonta africana ENSLAFG00000023242 I 0.000
LCUP007674 Lucilia cuprina LCUP007674 I 0.000
LLOJ006782 Lutzomyia longipalpis LLOJ006782 I 0.000
ENSP00000371846 Macaca fascicularis ENSP00000371846 I 0.000
DEAF1 Macaca mulatta ENSMMUG00000002660 I 0.000
DEAF1 Meleagris gallopavo ENSMGAG00000003765 I 0.000
MCINX013640 Melitaea cinxia MCINX013640 I 0.000
MDOA003373 Musca domestica MDOA003373 I 0.000
ENSMPUG00000008992 Mustela putorius furo ENSMPUG00000008992 I 0.000
Deaf1 Mus musculus ENSMUSG00000058886 I 0.000
Myotis_brandtii_DEAF1_10008461 Myotis brandtii Myotis_brandtii_DEAF1_10008461 I 0.000
DEAF1 Myotis lucifugus ENSMLUG00000026576 I 0.000
NV18168 Nasonia vitripennis NV18168 I 0.000
ENSNLEG00000008479 Nomascus leucogenys ENSNLEG00000008479 I 0.000
ENSOPRG00000002240 Ochotona princeps ENSOPRG00000002240 I 0.000
Ocbimv22013386m.g Octopus bimaculoides Ocbimv22013386m.g I 0.000
Ogr05554 Ophisaurus gracilis Ogr05554 I 0.000
DEAF1 Otolemur garnettii ENSOGAG00000006434 I 0.000
ENSOARG00000006285 Ovis aries ENSOARG00000006285 I 0.000
DEAF1 Pan troglodytes ENSPTRG00000003129 D 0.000
ENSPANG00000008597 Papio anubis ENSPANG00000008597 I 0.000
PHUM581340 Pediculus humanus PHUM581340 I 0.000
ENSPSIG00000016545 Pelodiscus sinensis ENSPSIG00000016545 I 0.000
ENSPMAG00000004264 Petromyzon marinus ENSPMAG00000004264 I 0.000
PPAI007052 Phlebotomus papatasi PPAI007052 I 0.000
Pvit_08245 Pogona vitticeps Pvit_08245 I 0.000
DEAF1 Pteropus vampyrus ENSPVAG00000006883 I 0.000
Deaf1 Rattus norvegicus ENSRNOG00000017960 I 0.000
RPRC001228 Rhodnius prolixus RPRC001228 I 0.000
Sakowv30032927m.g Saccoglossus kowalevskii Sakowv30032927m.g I 0.000
SINV20880 Solenopsis invicta SINV20880 I 0.000
SMAR003119 Strigamia maritima SMAR003119 I 0.000
SPU_014381 Strongylocentrotus purpuratus SPU_014381 N 0.000
DEAF1 Sus scrofa ENSSSCG00000012850 I 0.000
DEAF1 Taeniopygia guttata ENSTGUG00000007185 I 0.000
TC000085 Tribolium castaneum TC000085 I 0.000
DEAF1 Tursiops truncatus ENSTTRG00000015418 I 0.000
L798_01684 Zootermopsis nevadensis L798_01684 I 0.000