irf1.L (Xenopus laevis)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00605 (IRF) IPR001346 XB-GENE-6255163 T244624_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF1
M08142_2.00 		Homo sapiens
RWANNGAAASYGAAASYRNNN
NNNYRSTTTCRSTTTCNNTWY		 ChIP-seq
Mathelier et al.(2014)
MA0050.2 		0.848 0.848
IRF1
M09233_2.00 		Homo sapiens
NRAANNGAAASWGAAASHRN
NYDSTTTCWSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF1_HUMAN.H11MO.0.A 		0.848 0.848
Irf1
M09242_2.00 		Mus musculus
VRAANNGAAASYGAAASYVN
NBRSTTTCRSTTTCNNTTYB		 Misc
Kulakovskiy et al.(2013)
IRF1_MOUSE.H11MO.0.A 		0.848 0.848
IRF1
M09594_2.00 		Homo sapiens
GAAASTGAAASY
RSTTTCASTTTC		 Misc
Heinz et al.(2010)
PBMC-IRF1_GSE43036 		0.848 0.848
IRF1
M10879_2.00 		Homo sapiens
SAAAASYGAAASY
RSTTTCRSTTTTS		 Transfac
Matys et al.(2006)
V$IRF1_01 		0.848 0.848
IRF1
M10880_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_03 		0.848 0.848
IRF1
M10881_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q5 		0.848 0.848
IRF1
M10882_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF1_Q6 		0.848 0.848
IRF2
M05545_2.00 		Homo sapiens
NGAAAVYGAAAS
STTTCRBTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_HT-SELEX 		0.762 0.762
IRF2
M02691_2.00 		Homo sapiens
SGAAAGYGAAASYNWWHH
DDWWNRSTTTCRCTTTCS		 SELEX
Mathelier et al.(2014)
MA0051.1 		0.762 0.762
IRF2
M09237_2.00 		Homo sapiens
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_HUMAN.H11MO.0.A 		0.762 0.762
IRF2
M09596_2.00 		Homo sapiens
NRAAVNRRAASB
VSTTYYNBTTYN		 Misc
Heinz et al.(2010)
Erythroblas-IRF2_GSE36985 		0.762 0.762
IRF2
M10892_2.00 		Homo sapiens
GAAAAGYGAAASY
RSTTTCRCTTTTC		 Transfac
Matys et al.(2006)
V$IRF2_01 		0.762 0.762
IRF2
M10893_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF2_Q6 		0.762 0.762
IRF2
M05546_2.00 		Homo sapiens
NGAAASYGAAAS
STTTCRSTTTCN		 SELEX
Yin et al.(2017)
IRF2_FL_Methyl-HT-SELEX 		0.762 0.762
Irf2
M00805_2.00 		Mus musculus
NDWNHGAAAV
BTTTCDNWHN		 PBM
Weirauch et al.(2013)
pTH2835 		0.752 0.752
Irf2
M09245_2.00 		Mus musculus
NRAANNGAAASYGAAASYRV
BYRSTTTCRSTTTCNNTTYN		 Misc
Kulakovskiy et al.(2013)
IRF2_MOUSE.H11MO.0.B 		0.752 0.752
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH59984 IRF 7 112

Links

Other IRF family TFs
Other Xenopus laevis TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_219293 Agaricus bisporus AGABI2DRAFT_219293 N
M378DRAFT_72609 Amanita muscaria M378DRAFT_72609 N
BOTBODRAFT_178587 Botryobasidium botryosum BOTBODRAFT_178587 N
CERSUDRAFT_111616 Ceriporiopsis subvermispora CERSUDRAFT_111616 N
CC1G_00087 Coprinopsis cinerea CC1G_00087 N
DACRYDRAFT_119248 Dacryopinax sp DACRYDRAFT_119248 N
FIBRA_04937 Fibroporia radiculosa FIBRA_04937 N
FOMPIDRAFT_151160 Fomitopsis pinicola FOMPIDRAFT_151160 N
GALMADRAFT_205370 Galerina marginata GALMADRAFT_205370 N
GLOTRDRAFT_114211 Gloeophyllum trabeum GLOTRDRAFT_114211 N
M413DRAFT_16666 Hebeloma cylindrosporum M413DRAFT_16666 N
Genemark.4002_g Heterobasidion annosum Genemark.4002_g N
HETIRDRAFT_311972 Heterobasidion irregulare HETIRDRAFT_311972 N
JAAARDRAFT_52756 Jaapia argillacea JAAARDRAFT_52756 N
K443DRAFT_672578 Laccaria amethystina K443DRAFT_672578 N
LACBIDRAFT_292149 Laccaria bicolor LACBIDRAFT_292149 N
Moror_17679 Moniliophthora roreri Moror_17679 N
PHACADRAFT_250391 Phanerochaete carnosa PHACADRAFT_250391 N
PHLGIDRAFT_97590 Phlebiopsis gigantea PHLGIDRAFT_97590 N
PILCRDRAFT_811575 Piloderma croceum PILCRDRAFT_811575 N
PISMIDRAFT_6124 Pisolithus microcarpus PISMIDRAFT_6124 N
M404DRAFT_13091 Pisolithus tinctorius M404DRAFT_13091 N
PLEOSDRAFT_176003 Pleurotus ostreatus PLEOSDRAFT_176003 N
V565_194320 Rhizoctonia solani V565_194320 N
SCHCODRAFT_255185 Schizophyllum commune SCHCODRAFT_255185 N
SERLA73DRAFT_85551 Serpula lacrymans SERLA73DRAFT_85551 N
CY34DRAFT_20706 Suillus luteus CY34DRAFT_20706 N