CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LBD22
(
Arabidopsis thaliana
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
AT3G13850
T244888_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G13850.1
LOB
36
134
ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHTIMFQSDARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQ
Links
Other
LOB
family TFs
Other
Arabidopsis thaliana
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc03g059300.1
Solanum lycopersicum
Solyc03g059300.1
N
Solyc03g062670.1
Solanum lycopersicum
Solyc03g062670.1
N
Solyc03g062750.1
Solanum lycopersicum
Solyc03g062750.1
N
Solyc03g114260.1
Solanum lycopersicum
Solyc03g114260.1
N
PGSC0003DMG400037921
Solanum tuberosum
PGSC0003DMG400037921
N
PGSC0003DMG400039478
Solanum tuberosum
PGSC0003DMG400039478
N
PGSC0003DMG400045571
Solanum tuberosum
PGSC0003DMG400045571
N
PGSC0003DMG400045663
Solanum tuberosum
PGSC0003DMG400045663
N
PGSC0003DMG400046943
Solanum tuberosum
PGSC0003DMG400046943
N
PGSC0003DMG400047167
Solanum tuberosum
PGSC0003DMG400047167
N