CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART01G20190
(
Oryza barthii
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
OBART01G20190
T245528_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART01G20190.1
LOB
81
182
AEAAMRHLQGAEDGVLAGVPARVILHGDEKVRLLNAQRLFGTRNIRHFVQATLPEKQDDLMSSIKYEAQVWARNPQSCATGVMWHLERKVERELAKLSKLRQ
Links
Other
LOB
family TFs
Other
Oryza barthii
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA01G0167300
Oryza glaberrima
ORGLA01G0167300
N
0.990
BGIOSGA003807
Oryza indica
BGIOSGA003807
N
0.772
OLONG_006427
Oryza longistaminata
OLONG_006427
N
0.760
ONIVA01G22770
Oryza nivara
ONIVA01G22770
N
0.729
ORUFI01G22760
Oryza rufipogon
ORUFI01G22760
N
0.750