CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm024623
(
Prunus mume
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Pm024623
T246393_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm024623
LOB
10
108
ACAACKYQRRKCTPECPLAPFFPADQPKMFQNAHKLFGVSNIVKILKNLEPEMKFEAMRSIIYQANIRDKFPVYGCWEVIWQLQYQLLLAEEELQAVQA
Links
Other
LOB
family TFs
Other
Prunus mume
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART09G11970
Oryza barthii
OBART09G11970
N
ORGLA09G0090800
Oryza glaberrima
ORGLA09G0090800
N
OGLUM09G12360
Oryza glumaepatula
OGLUM09G12360
N
BGIOSGA030852
Oryza indica
BGIOSGA030852
N
OLONG_002199
Oryza longistaminata
OLONG_002199
N
OMERI09G09450
Oryza meridionalis
OMERI09G09450
N
ONIVA09G12330
Oryza nivara
ONIVA09G12330
N
ORUFI09G12830
Oryza rufipogon
ORUFI09G12830
N
OS09G0444100
Oryza sativa
OS09G0444100
N