CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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28207.m000107
(
Ricinus communis
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
28207.m000107
T246401_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
28207.m000107
LOB
4
107
SCSGCRVLRKGCSDDCTIKPCLQWLNSPKSQANATLFLAKFYGRAGLINLINAGPQHLRPAIFKSLLYEACGRIVNPVYGSVGLLWTRNWQLCQAAVEAVLRGE
Links
Other
LOB
family TFs
Other
Ricinus communis
TFs
171 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aqu1.223280
Amphimedon queenslandica
Aqu1.223280
N
ENSCING00000018982
Ciona intestinalis
ENSCING00000018982
I
ENSCSAVG00000003120
Ciona savignyi
ENSCSAVG00000003120
I
Yy2
Dipodomys ordii
ENSDORG00000011068
N
ECANG7_04162
Echinococcus canadensis
ECANG7_04162
N
EmuJ_000526400
Echinococcus multilocularis
EmuJ_000526400
N
HmN_000055100
Hymenolepis microstoma
HmN_000055100
N
MCOS_0000059401
Mesocestoides corti
MCOS_0000059401
N
A_04912
Schistosoma haematobium
A_04912
N
Sjc_0032810
Schistosoma japonicum
Sjc_0032810
N
Smp_164190
Schistosoma mansoni
Smp_164190
N
SMTD_0001228301
Schistosoma mattheei
SMTD_0001228301
N
TsM_001027300
Taenia solium
TsM_001027300
N