CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava16668.m1
(
Manihot esculenta
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
cassava16668.m1
T246442_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava16668.m1
LOB
38
84
PCATCEILRRRSAEKCVLARYFPLIEPKKFTIAHRVFGASNIIKFLQ
Links
Other
LOB
family TFs
Other
Manihot esculenta
TFs
139 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
hlfb
Danio rerio
ENSDARG00000061011
I
0.000
ENSLACG00000012701
Latimeria chalumnae
ENSLACG00000012701
I
0.000
ENSONIG00000009563
Oreochromis niloticus
ENSONIG00000009563
I
0.000
hlfa
Oryzias latipes
ENSORLG00000000969
I
0.000
ENSPFOG00000018222
Poecilia formosa
ENSPFOG00000018222
I
0.000
hlfa
Takifugu rubripes
ENSTRUG00000003731
I
0.000
ENSTNIG00000002167
Tetraodon nigroviridis
ENSTNIG00000002167
I
0.000
ENSTNIG00000003545
Tetraodon nigroviridis
ENSTNIG00000003545
I
0.000
hlfa
Tetraodon nigroviridis
ENSTNIG00000011274
I
0.000