Cucsa.250570 (Cucumis sativus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Cucsa.250570 T246519_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.828 0.828
LOB
M06966_2.00 		Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH
DCCKCCKYHDYYDCCGCCGBN		 Dap-seq
OMalley et al.(2016)
LOB_col_a 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.250570.1 LOB 7 105

Links

Other LOB family TFs
Other Cucumis sativus TFs

272 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006419 Ailuropoda melanoleuca ENSAMEG00000006419 I 0.000
Alligator_sinensis_CCG003455.1 Alligator sinensis Alligator_sinensis_CCG003455.1 I 0.000
ENSAMXG00000001207 Astyanax mexicanus ENSAMXG00000001207 I 0.000
ENSBTAP00000051139-D1 Bos grunniens ENSBTAP00000051139-D1 I 0.000
ZBTB3 Bos taurus ENSBTAG00000021329 I 0.000
ZBTB3 Callithrix jacchus ENSCJAG00000018693 I 0.000
ZBTB3 Canis familiaris ENSCAFG00000015650 I 0.000
ZBTB3 Cavia porcellus ENSCPOG00000011665 I 0.000
Cmyd_10007335 Chelonia mydas Cmyd_10007335 I 0.000
ENSCSAG00000006712 Chlorocebus sabaeus ENSCSAG00000006712 I 0.000
ZBTB3 Choloepus hoffmanni ENSCHOG00000012845 I 0.000
zbtb3 Danio rerio ENSDARG00000036235 I 0.000
ENSDNOG00000006546 Dasypus novemcinctus ENSDNOG00000006546 I 0.000
ZBTB3 Dasypus novemcinctus ENSDNOG00000043011 I 0.000
Zbtb3 Dipodomys ordii ENSDORG00000015697 I 0.000
ZBTB3 Felis catus ENSFCAG00000027690 I 0.000
zbtb3 Gasterosteus aculeatus ENSGACG00000016930 I 0.000
ZBTB3 Gorilla gorilla ENSGGOG00000011735 I 0.000
ZBTB3 Homo sapiens ENSG00000185670 I 0.000
ENSSTOG00000027839 Ictidomys tridecemlineatus ENSSTOG00000027839 I 0.000
ENSLACG00000006879 Latimeria chalumnae ENSLACG00000006879 I 0.000
ENSLOCG00000001327 Lepisosteus oculatus ENSLOCG00000001327 I 0.000
ENSP00000378286 Macaca fascicularis ENSP00000378286 I 0.000
ENSMMUG00000014369 Macaca mulatta ENSMMUG00000014369 I 0.000
ENSMEUG00000015659 Macropus eugenii ENSMEUG00000015659 I 0.000
ZBTB3 Microcebus murinus ENSMICG00000009961 I 0.000
ENSMODG00000007952 Monodelphis domestica ENSMODG00000007952 I 0.000
ENSMPUG00000013694 Mustela putorius furo ENSMPUG00000013694 I 0.000
Zbtb3 Mus musculus ENSMUSG00000071661 D 0.000
ZBTB3 Myotis lucifugus ENSMLUG00000011020 I 0.000
ENSNLEG00000004096 Nomascus leucogenys ENSNLEG00000004096 I 0.000
Ogr03307 Ophisaurus gracilis Ogr03307 I 0.000
ENSOANG00000001309 Ornithorhynchus anatinus ENSOANG00000001309 I 0.000
ZBTB3 Oryctolagus cuniculus ENSOCUG00000008921 I 0.000
zbtb3 Oryzias latipes ENSORLG00000002503 N 0.000
ZBTB3 Otolemur garnettii ENSOGAG00000011414 I 0.000
ENSOARG00000016929 Ovis aries ENSOARG00000016929 I 0.000
ZBTB3 Pan troglodytes ENSPTRG00000003785 I 0.000
ENSPANG00000008469 Papio anubis ENSPANG00000008469 I 0.000
ENSPSIG00000001786 Pelodiscus sinensis ENSPSIG00000001786 I 0.000
ENSPFOG00000009453 Poecilia formosa ENSPFOG00000009453 I 0.000
Pvit_09391 Pogona vitticeps Pvit_09391 I 0.000
ENSPPYG00000003148 Pongo abelii ENSPPYG00000003148 I 0.000
ZBTB3 Pteropus vampyrus ENSPVAG00000003477 I 0.000
Zbtb3 Rattus norvegicus ENSRNOG00000019461 I 0.000
ENSSSCG00000025351 Sus scrofa ENSSSCG00000025351 I 0.000
zbtb3 Takifugu rubripes ENSTRUG00000013773 I 0.000
zbtb3 Tetraodon nigroviridis ENSTNIG00000003382 I 0.000
ZBTB3 Tursiops truncatus ENSTTRG00000002477 I 0.000
zbtb3 Xenopus tropicalis XB-GENE-991962 I 0.000
ENSXMAG00000003145 Xiphophorus maculatus ENSXMAG00000003145 I 0.000