CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.330590
(
Cucumis sativus
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Cucsa.330590
T246527_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.330590.1
LOB
19
67
SYATCKILRWRCTKKCVLVAYFPPSEPLKFIIVHCIFGASNIIKLLLVR
Links
Other
LOB
family TFs
Other
Cucumis sativus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI3G27760
Brachypodium distachyon
BRADI3G27760
N
Bra039294
Brassica rapa
Bra039294
N
LPERR10G08380
Leersia perrieri
LPERR10G08380
N
OB10G19040
Oryza brachyantha
OB10G19040
N
Pavir.Ia01988
Panicum virgatum
Pavir.Ia01988
N
Pavir.Ib03139
Panicum virgatum
Pavir.Ib03139
N
Si038535m.g
Setaria italica
Si038535m.g
N
GRMZM2G365731
Zea mays
GRMZM2G365731
N