evm.TU.supercontig_6.423 (Carica papaya)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 evm.TU.supercontig_6.423 T246901_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.778 0.778
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_6.423 LOB 9 107

Links

Other LOB family TFs
Other Carica papaya TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CADAFLAG00004029 Aspergillus flavus CADAFLAG00004029 N 0.000
CADAORAG00006419 Aspergillus oryzae CADAORAG00006419 N 0.000
A1O3_06928 Capronia epimyces A1O3_06928 N 0.000
PV04_05168 Capronia semiimmersa PV04_05168 N 0.000
PV07_05309 Cladophialophora immunda PV07_05309 N 0.000
HMPREF1120_03172 Exophiala dermatitidis HMPREF1120_03172 N 0.000
PV06_06355 Exophiala oligosperma PV06_06355 N 0.000
PV06_11261 Exophiala oligosperma PV06_11261 N 0.000
PV11_02555 Exophiala sideris PV11_02555 N 0.000
PV08_08642 Exophiala spinifera PV08_08642 N 0.000
PV05_08387 Exophiala xenobiotica PV05_08387 N 0.000
Z517_06419 Fonsecaea pedrosoi Z517_06419 N 0.000
Z518_03564 Rhinocladiella mackenziei Z518_03564 N 0.000
TSTA_054290 Talaromyces stipitatus TSTA_054290 N 0.000