CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Cb01140
(
Panicum virgatum
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Pavir.Cb01140
T247190_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Cb01140.1.p
LOB
20
118
RCAACKYLRRRCAPGCVLAPYFPASQPRRYADVHAVFGTSNATRVLQSLPVQERGRAADTMAAEARWRVQDPVYGSTGVIDRLQQEIRAVQHELATTRA
Links
Other
LOB
family TFs
Other
Panicum virgatum
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g13279
Steinernema carpocapsae
L596_g13279
N
L889_g13009
Steinernema feltiae
L889_g13009
N
L893_g11797
Steinernema glaseri
L893_g11797
N
L898_g32484
Steinernema monticolum
L898_g32484
N
L892_g30447
Steinernema scapterisci
L892_g30447
N