Bra026903 (Brassica rapa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Bra026903 T248028_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GT-1
M02274_2.00 		Arabidopsis lyrata
GGTTAACC
GGTTAACC		 PBM
Weirauch et al.(2014)
pTH9235 		0.968 0.771
MDP0000164819
M02280_2.00 		Malus domestica
YTAACYVNNN
NNNBRGTTAR		 PBM
Weirauch et al.(2014)
pTH9204 		0.965 0.800
GT-1
M02263_2.00 		Arabidopsis thaliana
KTTAACCM
KGGTTAAM		 PBM
Weirauch et al.(2014)
pTH8149 		0.964 0.771
GT-1
M10896_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GT1_Q6_02 		0.964 0.771
GT-1
M10897_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GT1_Q6 		0.964 0.771
MTR_3g085960
M02270_2.00 		Medicago truncatula
NWAACYNNNN
NNNNRGTTWN		 PBM
Weirauch et al.(2014)
pTH9208 		0.961 0.629
cassava13991.valid.m1
M02279_2.00 		Manihot esculenta
NNDACHNNNN
NNNNDGTHNN		 PBM
Weirauch et al.(2014)
pTH9206 		0.946 0.771
OS04G0486400
M02273_2.00 		Oryza sativa
YTAACYNNNN
NNNNRGTTAR		 PBM
Weirauch et al.(2014)
pTH9338 		0.945 0.757
GT-4
M02265_2.00 		Arabidopsis thaliana
NHDACHNNNN
NNNNDGTHDN		 PBM
Weirauch et al.(2014)
pTH7910 		0.944 0.643
GT-4
M06974_2.00 		Arabidopsis thaliana
AACCATGGTTAADWYWWWWHH
DDWWWWRWHTTAACCATGGTT		 Dap-seq
OMalley et al.(2016)
AT3G25990_col_a 		0.944 0.643
GT-4
M06975_2.00 		Arabidopsis thaliana
WWMNYTAACYVWRRTTADNH
DNHTAAYYWBRGTTARNKWW		 Dap-seq
OMalley et al.(2016)
AT3G25990_colamp_a 		0.944 0.643
GLYMA11G37390
M02269_2.00 		Glycine max
BWDACYNNNN
NNNNRGTHWV		 PBM
Weirauch et al.(2014)
pTH9183 		0.939 0.614
fgenesh2_kg.5__353__AT3G25990.1
M02268_2.00 		Arabidopsis lyrata
NNNHAACCCCYNN
NNRGGGGTTDNNN		 PBM
Weirauch et al.(2014)
pTH9228 		0.930 0.671
PK20543.1
M01264_2.00 		Cannabis sativa
YTAACYNNNN
NNNNRGTTAR		 PBM
Lambert et al.(2019)
pTH11253 		0.920 0.771
29929.m004704
M02278_2.00 		Ricinus communis
NDNDHDHNHN
NDNDHDHNHN		 PBM
Weirauch et al.(2014)
pTH9339 		0.915 0.714
VIT_17s0000g10420
M02275_2.00 		Vitis vinifera
GTTAACYV
BRGTTAAC		 PBM
Weirauch et al.(2014)
pTH9293 		0.886 0.471
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra026903.1-P MADF 84 167

Links

Other MADF family TFs
Other Brassica rapa TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_057790 Acremonium chrysogenum ACRE_057790 N
AOL_s00043g47 Arthrobotrys oligospora AOL_s00043g47 N
ARB_06070 Arthroderma benhamiae ARB_06070 N
AFUA_4G04502 Aspergillus fumigatus CADAFUAG00001430 N
CADANGAG00010969 Aspergillus niger CADANGAG00010969 N
EURHEDRAFT_462177 Aspergillus ruber EURHEDRAFT_462177 N
M437DRAFT_56721 Aureobasidium melanogenum M437DRAFT_56721 N
M438DRAFT_272047 Aureobasidium pullulans M438DRAFT_272047 N
AUEXF2481DRAFT_4075 Aureobasidium subglaciale AUEXF2481DRAFT_4075 N
25037 Aureococcus anophagefferens 25037 N
BBA_04216 Beauveria bassiana BBA_04216 N
COCC4DRAFT_137933 Bipolaris maydis COCC4DRAFT_137933 N
COCMIDRAFT_90826 Bipolaris oryzae COCMIDRAFT_90826 N
COCSADRAFT_237465 Bipolaris sorokiniana COCSADRAFT_237465 N
COCVIDRAFT_100540 Bipolaris victoriae COCVIDRAFT_100540 N
COCCADRAFT_23204 Bipolaris zeicola COCCADRAFT_23204 N
BDDG_07871 Blastomyces dermatitidis BDDG_07871 N
BOTBODRAFT_102648 Botryobasidium botryosum BOTBODRAFT_102648 I
Bcin02g02960 Botrytis cinerea Bcin02g02960 N
PGUG_03027 Candida guilliermondii PGUG_03027 N
PGUG_04779 Candida guilliermondii PGUG_04779 I
CLUG_03610 Candida lusitaniae CLUG_03610 I
A1O1_04043 Capronia coronata A1O1_04043 N
A1O3_01459 Capronia epimyces A1O3_01459 N
PV04_05986 Capronia semiimmersa PV04_05986 N
Cagra.13025s0005 Capsella grandiflora Cagra.13025s0005 I
Carubv10007333m.g Capsella rubella Carubv10007333m.g I
Z519_07578 Cladophialophora bantiana Z519_07578 N
G647_06910 Cladophialophora carrionii G647_06910 I
PV07_04143 Cladophialophora immunda PV07_04143 N
A1O5_07765 Cladophialophora psammophila A1O5_07765 N
A1O7_05617 Cladophialophora yegresii A1O7_05617 N
CPUR_00409 Claviceps purpurea CPUR_00409 N
CLUG_03610 Clavispora lusitaniae CLUG_03610 I
CIMG_08549 Coccidioides immitis CIMG_08549 N
CPC735_062070 Coccidioides posadasii CPC735_062070 N
estExt_Genewise1Plus.C_50691 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_50691 N
CFIO01_04547 Colletotrichum fioriniae CFIO01_04547 N
CGGC5_1651 Colletotrichum gloeosporioides CGGC5_1651 N
GLRG_05271 Colletotrichum graminicola GLRG_05271 N
Cob_03924 Colletotrichum orbiculare Cob_03924 N
CSUB01_10826 Colletotrichum sublineola CSUB01_10826 N
W97_04615 Coniosporium apollinis W97_04615 N
estExt_Genewise1Plus.C_21911 Cryphonectria parasitica estExt_Genewise1Plus.C_21911 N
HMPREF1541_00864 Cyphellophora europaea HMPREF1541_00864 N
H072_3239 Dactylellina haptotyla H072_3239 N
DICSQDRAFT_139749 Dichomitus squalens DICSQDRAFT_139749 I
DOTSEDRAFT_73714 Dothistroma septosporum DOTSEDRAFT_73714 N
DRE_06964 Drechslerella stenobrocha DRE_06964 I
A1O9_03914 Exophiala aquamarina A1O9_03914 N
HMPREF1120_08552 Exophiala dermatitidis HMPREF1120_08552 N
PV10_07698 Exophiala mesophila PV10_07698 N
PV06_00857 Exophiala oligosperma PV06_00857 N
PV11_00595 Exophiala sideris PV11_00595 N
PV08_00880 Exophiala spinifera PV08_00880 N
PV05_05603 Exophiala xenobiotica PV05_05603 N
FIBRA_03155 Fibroporia radiculosa FIBRA_03155 I
FOMPIDRAFT_1134545 Fomitopsis pinicola FOMPIDRAFT_1134545 I
Z517_00530 Fonsecaea pedrosoi Z517_00530 N
GUITHDRAFT_43050 Guillardia theta GUITHDRAFT_43050 N
HCBG_08291 Histoplasma capsulatum HCBG_08291 N
LEMA_P076740.1 Leptosphaeria maculans LEMA_P076740.1 N
cassava3540.m1 Manihot esculenta cassava3540.m1 I
MELLADRAFT_42736 Melampsora laricipopulina MELLADRAFT_42736 I
MAM_02919 Metarhizium album MAM_02919 N
MANI_027126 Metarhizium anisopliae MANI_027126 N
MBR_04590 Metarhizium brunneum MBR_04590 N
MGU_04157 Metarhizium guizhouense MGU_04157 N
MAJ_01594 Metarhizium majus MAJ_01594 N
X797_007282 Metarhizium robertsii X797_007282 N
PGUG_03027 Meyerozyma guilliermondii PGUG_03027 N
PGUG_04779 Meyerozyma guilliermondii PGUG_04779 I
MVLG_00322 Microbotryum violaceum MVLG_00322 I
MCYG_02334 Microsporum canis MCYG_02334 N
MGYG_07335 Microsporum gypseum MGYG_07335 N
E5Q_05471 Mixia osmundae E5Q_05471 I
E5Q_06685 Mixia osmundae E5Q_06685 I
e_gw1.5.1289.1 Mucor circinelloides e_gw1.5.1289.1 N
e_gw1.8.771.1 Mucor circinelloides e_gw1.8.771.1 N
estExt_Genewise1Plus.C_12171 Mucor circinelloides estExt_Genewise1Plus.C_12171 N
fgeneshMC_pg.4_#_769 Mucor circinelloides fgeneshMC_pg.4_#_769 I
gw1.1.2475.1 Mucor circinelloides gw1.1.2475.1 I
gw1.3.1948.1 Mucor circinelloides gw1.3.1948.1 I
gw1.5.1361.1 Mucor circinelloides gw1.5.1361.1 N
gw1.8.770.1 Mucor circinelloides gw1.8.770.1 N
gw1.8.772.1 Mucor circinelloides gw1.8.772.1 N
gw1.18.319.1 Mycosphaerella fijiensis gw1.18.319.1 N
e_gw1.3.1300.1 Mycosphaerella graminicola e_gw1.3.1300.1 N
NFIA_028860 Neosartorya fischeri CADNFIAG00002767 N
hsf-2 Neurospora crassa NCU08480 N
estExt_fgenesh2_pg.C_100130 Neurospora discreta estExt_fgenesh2_pg.C_100130 N
PABG_01939 Paracoccidioides brasiliensis PABG_01939 N
PAAG_01459 Paracoccidioides sp lutzii PAAG_01459 N
Pc13g06670 Penicillium chrysogenum Pc13g06670 N
PDIP_15740 Penicillium digitatum PDIP_15740 N
PEX1_020890 Penicillium expansum PEX1_020890 N
PMAA_085950 Penicillium marneffei PMAA_085950 N
PCH_Pc13g06670 Penicillium rubens PCH_Pc13g06670 N
U727_0043017041 Penicillium solitum U727_0043017041 N
PFICI_09422 Pestalotiopsis fici PFICI_09422 I
PHACADRAFT_264175 Phanerochaete carnosa PHACADRAFT_264175 I
fgenesh1_pg.C_scaffold_3000687 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000687 I
estExt_Genewise1.C_280011 Phycomyces blakesleeanus estExt_Genewise1.C_280011 N
estExt_fgenesh1_pg.C_chr_6.10474 Pichia stipitis estExt_fgenesh1_pg.C_chr_6.10474 I
PILCRDRAFT_30307 Piloderma croceum PILCRDRAFT_30307 N
MYCFIDRAFT_146678 Pseudocercospora fijiensis MYCFIDRAFT_146678 N
GMDG_00035 Pseudogymnoascus destructans GMDG_00035 N
V499_07683 Pseudogymnoascus pannorum V499_07683 N
PaG_04170 Pseudozyma aphidis PaG_04170 N
PSEUBRA_SCAF16g05334 Pseudozyma brasiliensis PSEUBRA_SCAF16g05334 N
PFL1_03124 Pseudozyma flocculosa PFL1_03124 N
PHSY_000528 Pseudozyma hubeiensis PHSY_000528 N
PGTG_00887 Puccinia graminis PGTG_00887 I
PGTG_02256 Puccinia graminis PGTG_02256 I
PTT_06554 Pyrenophora teres PTT_06554 N
PTRG_08428 Pyrenophora triticirepentis PTRG_08428 N
Z518_08730 Rhinocladiella mackenziei Z518_08730 N
V565_035120 Rhizoctonia solani V565_035120 N
GLOINDRAFT_71916 Rhizophagus irregularis GLOINDRAFT_71916 N
RO3G_03231 Rhizopus oryzae RO3G_03231 N
RO3G_05814 Rhizopus oryzae RO3G_05814 I
RO3G_08485 Rhizopus oryzae RO3G_08485 N
RO3G_12112 Rhizopus oryzae RO3G_12112 I
RO3G_15039 Rhizopus oryzae RO3G_15039 N
RO3G_15483 Rhizopus oryzae RO3G_15483 N
RHTO_01429 Rhodosporidium toruloides RHTO_01429 I
RHTO_06861 Rhodosporidium toruloides RHTO_06861 I
RTG_02995 Rhodotorula glutinis RTG_02995 I
SapurV1A.0208s0230 Salix purpurea SapurV1A.0208s0230 I
SCHCODRAFT_269941 Schizophyllum commune SCHCODRAFT_269941 I
SETTUDRAFT_34274 Setosphaeria turcica SETTUDRAFT_34274 N
SMAC_00003 Sordaria macrospora SMAC_00003 N
SEPMUDRAFT_47596 Sphaerulina musiva SEPMUDRAFT_47596 N
SPPG_01116 Spizellomyces punctatus SPPG_01116 I
SPPG_03494 Spizellomyces punctatus SPPG_03494 N
SPPG_05445 Spizellomyces punctatus SPPG_05445 I
SPPG_07283 Spizellomyces punctatus SPPG_07283 I
fgenesh1_pg.C_scaffold_8000068 Sporobolomyces roseus fgenesh1_pg.C_scaffold_8000068 I
SNOG_08309 Stagonospora nodorum SNOG_08309 N
PMAA_085950 Talaromyces marneffei PMAA_085950 N
TSTA_121070 Talaromyces stipitatus TSTA_121070 N
THITE_2123849 Thielavia terrestris THITE_2123849 N
K437DRAFT_224239 Tilletiaria anomala K437DRAFT_224239 I
K437DRAFT_226763 Tilletiaria anomala K437DRAFT_226763 N
VHEMI09490 Torrubiella hemipterigena VHEMI09490 N
BN946_scf184851.g74 Trametes cinnabarina BN946_scf184851.g74 I
fgeneshTM_pg.1_#_391 Tremella mesenterica fgeneshTM_pg.1_#_391 N
TRIATDRAFT_174226 Trichoderma atroviride TRIATDRAFT_174226 N
TRIREDRAFT_27357 Trichoderma reesei TRIREDRAFT_27357 N
TRIVIDRAFT_125026 Trichoderma virens TRIVIDRAFT_125026 N
H101_00214 Trichophyton interdigitale H101_00214 N
TESG_06359 Trichophyton tonsurans TESG_06359 N
TRV_00290 Trichophyton verrucosum TRV_00290 N
A1Q1_08111 Trichosporon asahii A1Q1_08111 N
GSTUM_00004466001 Tuber melanosporum GSTUM_00004466001 N
UV8b_4500 Ustilaginoidea virens UV8b_4500 N
UHOR_03142 Ustilago hordei UHOR_03142 N
UM05182 Ustilago maydis UM05182 N
PV09_01119 Verruconis gallopava PV09_01119 N
J056_001839 Wallemia ichthyophaga J056_001839 I
J056_002394 Wallemia ichthyophaga J056_002394 I
WALSEDRAFT_18221 Wallemia sebi WALSEDRAFT_18221 N
BN7_4359 Wickerhamomyces ciferrii BN7_4359 N
YALI0_D04785g Yarrowia lipolytica YALI0_D04785g I
Mycgr3G38379 Zymoseptoria tritici Mycgr3G38379 N