CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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F775_31501
(
Aegilops tauschii
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
F775_31501
T248449_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT3G10030
M01258_2.00
Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN
PBM
Lambert et al.(2019)
pTH11538
0.847
0.606
AT3G10030
M06971_2.00
Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD
Dap-seq
OMalley et al.(2016)
AT3G10030_col_a
0.847
0.606
AT3G10030
M06972_2.00
Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD
Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a
0.847
0.606
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMT06403
MADF
3
75
RFEQLNRGNLRGRDWEDVAAAVTDGQGKSSGGKSVEQCKNKIDNLKKRYKVECQRIAGSASASLWPWYKQMEQ
Links
Other
MADF
family TFs
Other
Aegilops tauschii
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_100350.1
Arabidopsis lyrata
scaffold_100350.1
N
NAC006
Arabidopsis thaliana
AT1G03490
N
Bostr.25463s0411
Boechera stricta
Bostr.25463s0411
N