CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc11g012720.1
(
Solanum lycopersicum
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
Solyc11g012720.1
T249894_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc11g012720.1.1
MADF
305
377
RTRLDHKFLKGAKGSVWEEVADGLAKMGYIRTAKKCKEKWENINKYYKRTIDSGKTRPKNYRSCPYFHELDSL
Links
Other
MADF
family TFs
Other
Solanum lycopersicum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_07908
Cicer arietinum
Ca_07908
N
0.890
Cla009202
Citrullus lanatus
Cla009202
N
0.855
Cucsa.180580
Cucumis sativus
Cucsa.180580
N
0.845
GLYMA09G01670
Glycine max
GLYMA09G01670
N
0.882
GLYMA15G12591
Glycine max
GLYMA15G12591
N
0.857
MTR_2g026725
Medicago truncatula
MTR_2g026725
I
0.880
GSMUA_AchrUn_randomG03020_001
Musa acuminata
GSMUA_AchrUn_randomG03020_001
I
0.815
OBART10G15720
Oryza barthii
OBART10G15720
I
0.818
PGSC0003DMG400013300
Solanum tuberosum
PGSC0003DMG400013300
N
0.966
Traes_1DL_9EFDBD741
Triticum aestivum
Traes_1DL_9EFDBD741
I
0.820
VIT_00s0259g00210
Vitis vinifera
VIT_00s0259g00210
N
0.882
VIT_00s0956g00030
Vitis vinifera
VIT_00s0956g00030
N
0.882