CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla015773
(
Citrullus lanatus
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
Cla015773
T250135_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ASIL2
M06973_2.00
Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA
Dap-seq
OMalley et al.(2016)
At3g14180_col
0.892
0.789
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla015773
MADF
82
159
AWGERYLELSRGNLKQKHWKEVADIVSSREDYTKIPRTDIQCKNRIDTVKKKYKTEKAKITAGGGPSKWPFYDRLDQL
Links
Other
MADF
family TFs
Other
Citrullus lanatus
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si039992m.g
Setaria italica
Si039992m.g
N
0.000