Cla018015 (Citrullus lanatus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Cla018015 T250136_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.958 0.840
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.958 0.840
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.958 0.840
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.954 0.813
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla018015 MADF 162 244

Links

Other MADF family TFs
Other Citrullus lanatus TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_01879 Aegilops tauschii F775_01879 N
AMTR_s00002p00225810 Amborella trichopoda AMTR_s00002p00225810 I
Aquca_026_00421 Aquilegia coerulea Aquca_026_00421 I
Aquca_037_00261 Aquilegia coerulea Aquca_037_00261 I
Bostr.7365s0026 Boechera stricta Bostr.7365s0026 I
BRADI3G34200 Brachypodium distachyon BRADI3G34200 I
BRADI3G41940 Brachypodium distachyon BRADI3G41940 N
BRADI4G35400 Brachypodium distachyon BRADI4G35400 N
PK23618.1 Cannabis sativa PK23618.1 I
Cagra.4923s0009 Capsella grandiflora Cagra.4923s0009 I
Carubv10001082m.g Capsella rubella Carubv10001082m.g I
evm.TU.supercontig_141.19 Carica papaya evm.TU.supercontig_141.19 I
evm.TU.supercontig_71.72 Carica papaya evm.TU.supercontig_71.72 I
Ca_17603 Cicer arietinum Ca_17603 I
Cla006801 Citrullus lanatus Cla006801 I
Cla006802 Citrullus lanatus Cla006802 I
Cla007989 Citrullus lanatus Cla007989 I
Cla016454 Citrullus lanatus Cla016454 I
Ciclev10011214m.g Citrus clementina Ciclev10011214m.g I
Ciclev10019749m.g Citrus clementina Ciclev10019749m.g I
orange1.1g005651m.g Citrus sinensis orange1.1g005651m.g I
orange1.1g046178m.g Citrus sinensis orange1.1g046178m.g I
Cucsa.120830 Cucumis sativus Cucsa.120830 I
Cucsa.178140 Cucumis sativus Cucsa.178140 I
Cucsa.313090 Cucumis sativus Cucsa.313090 I
Eucgr.E00019 Eucalyptus grandis Eucgr.E00019 I
Eucgr.E01042 Eucalyptus grandis Eucgr.E01042 I
Eucgr.E01049 Eucalyptus grandis Eucgr.E01049 I
Thhalv10000853m.g Eutrema salsugineum Thhalv10000853m.g I
gene18651-v1.0-hybrid Fragaria vesca gene18651-v1.0-hybrid I
GLYMA07G05740 Glycine max GLYMA07G05740 I
GLYMA16G02320 Glycine max GLYMA16G02320 I
Gorai.001G151700 Gossypium raimondii Gorai.001G151700 I
Gorai.004G149500 Gossypium raimondii Gorai.004G149500 I
Gorai.006G216700 Gossypium raimondii Gorai.006G216700 I
Gorai.007G111800 Gossypium raimondii Gorai.007G111800 I
Gorai.008G128800 Gossypium raimondii Gorai.008G128800 I
MLOC_40535 Hordeum vulgare MLOC_40535 N
MLOC_71611 Hordeum vulgare MLOC_71611 I
LPERR03G22350 Leersia perrieri LPERR03G22350 I
LPERR08G19100 Leersia perrieri LPERR08G19100 I
LPERR09G12780 Leersia perrieri LPERR09G12780 I
LPERR10G15300 Leersia perrieri LPERR10G15300 I
Lus10000484.g Linum usitatissimum Lus10000484.g I
Lus10004574.g Linum usitatissimum Lus10004574.g I
Lus10004575.g Linum usitatissimum Lus10004575.g I
Lus10005999.g Linum usitatissimum Lus10005999.g I
Lus10030970.g Linum usitatissimum Lus10030970.g I
MDP0000160600 Malus domestica MDP0000160600 I
MDP0000224302 Malus domestica MDP0000224302 I
MDP0000242554 Malus domestica MDP0000242554 I
MDP0000603546 Malus domestica MDP0000603546 I
MDP0000729514 Malus domestica MDP0000729514 I
MDP0000859492 Malus domestica MDP0000859492 I
MDP0000900024 Malus domestica MDP0000900024 I
cassava29800.valid.m1 Manihot esculenta cassava29800.valid.m1 I
cassava32651.m1 Manihot esculenta cassava32651.m1 I
cassava45205.m1 Manihot esculenta cassava45205.m1 I
cassava8764.m1 Manihot esculenta cassava8764.m1 I
mgf001993m Mimulus guttatus mgf001993m I
GSMUA_Achr10G07470_001 Musa acuminata GSMUA_Achr10G07470_001 I
GSMUA_Achr11G17840_001 Musa acuminata GSMUA_Achr11G17840_001 I
GSMUA_Achr1G18910_001 Musa acuminata GSMUA_Achr1G18910_001 I
GSMUA_Achr2G18140_001 Musa acuminata GSMUA_Achr2G18140_001 I
GSMUA_Achr4G16980_001 Musa acuminata GSMUA_Achr4G16980_001 I
GSMUA_Achr7G04720_001 Musa acuminata GSMUA_Achr7G04720_001 I
GSMUA_Achr7G14640_001 Musa acuminata GSMUA_Achr7G14640_001 I
GSMUA_Achr8G14720_001 Musa acuminata GSMUA_Achr8G14720_001 I
GSMUA_AchrUn_randomG02900_001 Musa acuminata GSMUA_AchrUn_randomG02900_001 I
ORGLA08G0221300 Oryza glaberrima ORGLA08G0221300 I
ORGLA09G0131400 Oryza glaberrima ORGLA09G0131400 I
ORGLA10G0146100 Oryza glaberrima ORGLA10G0146100 I
OGLUM08G23650 Oryza glumaepatula OGLUM08G23650 I
OGLUM09G17250 Oryza glumaepatula OGLUM09G17250 I
OGLUM10G19510 Oryza glumaepatula OGLUM10G19510 I
BGIOSGA026551 Oryza indica BGIOSGA026551 I
BGIOSGA029426 Oryza indica BGIOSGA029426 I
BGIOSGA033493 Oryza indica BGIOSGA033493 I
OLONG_011820 Oryza longistaminata OLONG_011820 I
OMERI08G17270 Oryza meridionalis OMERI08G17270 I
ONIVA08G25370 Oryza nivara ONIVA08G25370 I
ONIVA09G17720 Oryza nivara ONIVA09G17720 I
ONIVA10G22030 Oryza nivara ONIVA10G22030 I
OPUNC10G17860 Oryza punctata OPUNC10G17860 I
ORUFI08G24840 Oryza rufipogon ORUFI08G24840 I
ORUFI09G17940 Oryza rufipogon ORUFI09G17940 I
ORUFI10G20700 Oryza rufipogon ORUFI10G20700 I
OS08G0543700 Oryza sativa OS08G0543700 I
OS09G0519100 Oryza sativa OS09G0519100 I
MYC2 Oryza sativa OS10G0575000 I
Pavir.Ba01305 Panicum virgatum Pavir.Ba01305 I
Pavir.Ba01307 Panicum virgatum Pavir.Ba01307 I
Pavir.Fa00073 Panicum virgatum Pavir.Fa00073 N
Pavir.Fa00118 Panicum virgatum Pavir.Fa00118 N
Pavir.Fb00905 Panicum virgatum Pavir.Fb00905 N
Pavir.Fb02191 Panicum virgatum Pavir.Fb02191 N
Pavir.Ia03512 Panicum virgatum Pavir.Ia03512 I
Pavir.J01049 Panicum virgatum Pavir.J01049 I
Pavir.J28686 Panicum virgatum Pavir.J28686 I
Pavir.J38781 Panicum virgatum Pavir.J38781 I
Pavir.J40111 Panicum virgatum Pavir.J40111 I
POPTR_0001s02450 Populus trichocarpa POPTR_0001s02450 I
POPTR_0002s17750 Populus trichocarpa POPTR_0002s17750 I
PRUPE_ppa004680mg Prunus persica PRUPE_ppa004680mg I
27964.m000352 Ricinus communis 27964.m000352 I
27964.m000356 Ricinus communis 27964.m000356 I
29827.m002528 Ricinus communis 29827.m002528 I
SapurV1A.0003s0670 Salix purpurea SapurV1A.0003s0670 I
SapurV1A.0741s0050 Salix purpurea SapurV1A.0741s0050 I
Si005033m.g Setaria italica Si005033m.g N
Si014241m.g Setaria italica Si014241m.g N
Si015024m.g Setaria italica Si015024m.g N
Si015026m.g Setaria italica Si015026m.g N
Si015213m.g Setaria italica Si015213m.g N
Si015343m.g Setaria italica Si015343m.g N
Si015513m.g Setaria italica Si015513m.g I
Si031900m.g Setaria italica Si031900m.g I
Si032741m.g Setaria italica Si032741m.g I
Si039973m.g Setaria italica Si039973m.g I
Solyc01g096370.2 Solanum lycopersicum Solyc01g096370.2 I
PGSC0003DMG400018332 Solanum tuberosum PGSC0003DMG400018332 I
Sb01g028230 Sorghum bicolor Sb01g028230 I
Sb02g030110 Sorghum bicolor Sb02g030110 I
Sb02g030120 Sorghum bicolor Sb02g030120 I
Sb07g025310 Sorghum bicolor Sb07g025310 I
Sb07g025330 Sorghum bicolor Sb07g025330 N
Sb07g025340 Sorghum bicolor Sb07g025340 N
Sb2273s002010 Sorghum bicolor Sb2273s002010 N
TCM_005064 Theobroma cacao TCM_005064 I
TCM_015714 Theobroma cacao TCM_015714 I
Traes_2BL_F38E032331 Triticum aestivum Traes_2BL_F38E032331 N
Traes_5BL_C753673FD Triticum aestivum Traes_5BL_C753673FD N
Traes_5BL_D45BBFEBC Triticum aestivum Traes_5BL_D45BBFEBC N
Traes_5BL_E86F89671 Triticum aestivum Traes_5BL_E86F89671 N
Traes_5DL_5DA6E1A09 Triticum aestivum Traes_5DL_5DA6E1A09 N
Traes_5DL_F32936F9C Triticum aestivum Traes_5DL_F32936F9C N
TRIUR3_29141 Triticum urartu TRIUR3_29141 N
VIT_02s0012g01320 Vitis vinifera VIT_02s0012g01320 I
VIT_02s0025g02610 Vitis vinifera VIT_02s0025g02610 I
VIT_15s0048g02820 Vitis vinifera VIT_15s0048g02820 I
GRMZM2G001930 Zea mays GRMZM2G001930 I
GRMZM2G013688 Zea mays GRMZM2G013688 I
GRMZM2G038479 Zea mays GRMZM2G038479 I
GRMZM2G049229 Zea mays GRMZM2G049229 I
GRMZM2G107560 Zea mays GRMZM2G107560 I
GRMZM2G472671 Zea mays GRMZM2G472671 N