28077.m000081 (Ricinus communis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 28077.m000081 T250435_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.895 0.639
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.895 0.639
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.895 0.639
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.859 0.597
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
28077.m000081 MADF 111 195

Links

Other MADF family TFs
Other Ricinus communis TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EDEG_00332 Edhazardia aedis EDEG_00332 N
CAD25386 Encephalitozoon cuniculi CAD25386 N
EHEL_060180 Encephalitozoon hellem EHEL_060180 N
Eint_060160 Encephalitozoon intestinalis Eint_060160 N
EBI_26398 Enterocytozoon bieneusi EBI_26398 N
M896_060270 Ordospora colligata M896_060270 N
THOM_3089 Trachipleistophora hominis THOM_3089 N
VCUG_01723 Vavraia culicis VCUG_01723 N
VICG_01349 Vittaforma corneae VICG_01349 N