Eucgr.A01571 (Eucalyptus grandis)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Eucgr.A01571 T250657_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.949 0.833
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.948 0.819
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.948 0.819
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.948 0.819
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A01571.1 MADF 142 221

Links

Other MADF family TFs
Other Eucalyptus grandis TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF541 Callithrix jacchus ENSCJAG00000011435 I
ZNF541 Cavia porcellus ENSCPOG00000020622 N
ENSEEUG00000009366 Erinaceus europaeus ENSEEUG00000009366 N
ENSGALG00000022619 Gallus gallus ENSGALG00000022619 N
ZNF541 Homo sapiens ENSG00000118156 D
ENSMMUP00000019323 Macaca fascicularis ENSMMUP00000019323 N
ZNF541 Macaca mulatta ENSMMUG00000014729 N
ZNF541 Microcebus murinus ENSMICG00000017737 N
ENSSARG00000013713 Sorex araneus ENSSARG00000013713 N
ZNF541 Sus scrofa ENSSSCG00000003119 I
ENSTBEG00000005105 Tupaia belangeri ENSTBEG00000005105 N