evm.TU.supercontig_128.55 (Carica papaya)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 evm.TU.supercontig_128.55 T250666_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.924 0.747
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.924 0.747
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.924 0.747
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.893 0.693
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_128.55 MADF 98 190

Links

Other MADF family TFs
Other Carica papaya TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_02058 Capronia epimyces A1O3_02058 N
A1O3_05986 Capronia epimyces A1O3_05986 N
Z519_03363 Cladophialophora bantiana Z519_03363 N
A1O5_04090 Cladophialophora psammophila A1O5_04090 N
A1O9_05200 Exophiala aquamarina A1O9_05200 N
PV05_08733 Exophiala xenobiotica PV05_08733 N
Z518_08035 Rhinocladiella mackenziei Z518_08035 N