MDP0000301451 (Malus domestica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 MDP0000301451 T250771_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G58630
M06976_2.00 		Arabidopsis thaliana
HNTCGCCGGARWHDN
NHDWYTCCGGCGAND		 Dap-seq
OMalley et al.(2016)
AT3G58630_col_a 		0.936 0.708
AT3G58630
M06977_2.00 		Arabidopsis thaliana
NNTCGCCGGARWHDN
NHDWYTCCGGCGANN		 Dap-seq
OMalley et al.(2016)
AT3G58630_colamp_a 		0.936 0.708
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000301451 MADF 47 127

Links

Other MADF family TFs
Other Malus domestica TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_1AL_C6CACDF78 Triticum aestivum Traes_1AL_C6CACDF78 N
Traes_1BS_613E9DBA6 Triticum aestivum Traes_1BS_613E9DBA6 N
Traes_1DL_0CDB6989D Triticum aestivum Traes_1DL_0CDB6989D N
TRAES3BF181700010CFD_g Triticum aestivum TRAES3BF181700010CFD_g N
Traes_5AL_DB9E0AA8D Triticum aestivum Traes_5AL_DB9E0AA8D N
Traes_5DL_A9969D596 Triticum aestivum Traes_5DL_A9969D596 N
Traes_6AS_073DEE100 Triticum aestivum Traes_6AS_073DEE100 N
Traes_6AS_E6F39D946 Triticum aestivum Traes_6AS_E6F39D946 N
Traes_6BL_A62A29F7B Triticum aestivum Traes_6BL_A62A29F7B N
Traes_6BS_276ACF176 Triticum aestivum Traes_6BS_276ACF176 N
Traes_6BS_938E60C80 Triticum aestivum Traes_6BS_938E60C80 N
Traes_6BS_945FD8DAC1 Triticum aestivum Traes_6BS_945FD8DAC1 N
Traes_6BS_9FAF15CD0 Triticum aestivum Traes_6BS_9FAF15CD0 N
Traes_6BS_EE1BBAFD1 Triticum aestivum Traes_6BS_EE1BBAFD1 N
Traes_6DS_3A1EA267A Triticum aestivum Traes_6DS_3A1EA267A N
TRIUR3_06344 Triticum urartu TRIUR3_06344 N