SapurV1A.0439s0120 (Salix purpurea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 SapurV1A.0439s0120 T250849_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.880 0.616
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.880 0.616
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.880 0.616
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.838 0.616
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0439s0120.1.p MADF 94 175
SapurV1A.0439s0120.2.p MADF 94 175

Links

Other MADF family TFs
Other Salix purpurea TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_30991 Aegilops tauschii F775_30991 I
Eucgr.I02464 Eucalyptus grandis Eucgr.I02464 I
MLOC_69710 Hordeum vulgare MLOC_69710 I
LPERR09G05860 Leersia perrieri LPERR09G05860 I
LPERR09G13180 Leersia perrieri LPERR09G13180 I
cassava21654.m1 Manihot esculenta cassava21654.m1 I
GSMUA_Achr1G16280_001 Musa acuminata GSMUA_Achr1G16280_001 I
OB09G23870 Oryza brachyantha OB09G23870 I
OMERI09G12780 Oryza meridionalis OMERI09G12780 I
OPUNC09G15600 Oryza punctata OPUNC09G15600 I
HOX6 Oryza sativa OS09G0528200 D
SapurV1A.0617s0090 Salix purpurea SapurV1A.0617s0090 I
Traes_5BL_9C32B27E2 Triticum aestivum Traes_5BL_9C32B27E2 I
Traes_5DL_96F9EED93 Triticum aestivum Traes_5DL_96F9EED93 I
TRIUR3_11780 Triticum urartu TRIUR3_11780 I