LjSGA_010102.1 (Lotus japonicus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 LjSGA_010102.1 T251212_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK27404.1_CONSTRUCT
M01261_2.00 		PBM CONSTRUCTS
NNGGTAAAWN
NWTTTACCNN		 PBM
Lambert et al.(2019)
pTH11345 		0.925 0.797
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_010102.1 MADF 76 147

Links

Other MADF family TFs
Other Lotus japonicus TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK27404.1 Cannabis sativa PK27404.1 I 0.925
LjT17C10.90.nd Lotus japonicus LjT17C10.90.nd I 0.899
PK27404.1_CONSTRUCT PBM CONSTRUCTS PK27404.1_CONSTRUCT D 0.925