LjSGA_010694.1 (Lotus japonicus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 LjSGA_010694.1 T251213_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL2
M06973_2.00 		Arabidopsis thaliana
TCRCCGGARAH
DTYTCCGGYGA		 Dap-seq
OMalley et al.(2016)
At3g14180_col 		0.925 0.795
ASIL1
M02264_2.00 		Arabidopsis thaliana
NNDHCGDHNN
NNDHCGDHNN		 PBM
Weirauch et al.(2014)
pTH7464 		0.813 0.534
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_010694.1 MADF 91 170

Links

Other MADF family TFs
Other Lotus japonicus TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_18110 Cicer arietinum Ca_18110 N 0.000
GLYMA01G02930 Glycine max GLYMA01G02930 N 0.000
chr1.CM0113.660.nd Lotus japonicus chr1.CM0113.660.nd N 0.000