LjT17C10.90.nd (Lotus japonicus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 LjT17C10.90.nd T251222_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK27404.1_CONSTRUCT
M01261_2.00 		PBM CONSTRUCTS
NNGGTAAAWN
NWTTTACCNN		 PBM
Lambert et al.(2019)
pTH11345 		0.867 0.676
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjT17C10.90.nd MADF 72 145

Links

Other MADF family TFs
Other Lotus japonicus TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002077 Ailuropoda melanoleuca ENSAMEG00000002077 I
ENSAPLG00000010379 Anas platyrhynchos ENSAPLG00000010379 I
THAP12 Anolis carolinensis ENSACAG00000017074 I
Afo_R006000 Aptenodytes forsteri Afo_R006000 I
ENSAMXG00000002922 Astyanax mexicanus ENSAMXG00000002922 I
ENSP00000260045-D1 Bos grunniens ENSP00000260045-D1 I
THAP12 Bos taurus ENSBTAG00000031609 I
Brh_R010409 Buceros rhinoceros Brh_R010409 I
ENSCJAG00000012300 Callithrix jacchus ENSCJAG00000012300 I
Cmyd_10020724 Chelonia mydas Cmyd_10020724 I
ENSCHOG00000005539 Choloepus hoffmanni ENSCHOG00000005539 I
ENSCHOG00000009417 Choloepus hoffmanni ENSCHOG00000009417 I
ENSCHOG00000007628 Choloepus hoffmanni ENSCHOG00000007628 I
prkrirb Danio rerio ENSDARG00000020964 D
ENSDNOG00000000774 Dasypus novemcinctus ENSDNOG00000000774 I
THAP12 Equus caballus ENSECAG00000021982 I
THAP12 Erinaceus europaeus ENSEEUG00000003060 I
THAP12 Felis catus ENSFCAG00000006764 I
ENSGMOG00000010245 Gadus morhua ENSGMOG00000010245 I
THAP12 Gallus gallus ENSGALG00000000838 D
prkrirb Gasterosteus aculeatus ENSGACG00000010435 I
Gfo_R003337 Geospiza fortis Gfo_R003337 I
ENSGGOG00000023767 Gorilla gorilla ENSGGOG00000023767 I
ENSGGOG00000026052 Gorilla gorilla ENSGGOG00000026052 I
ENSLOCG00000004788 Lepisosteus oculatus ENSLOCG00000004788 I
ENSP00000260045 Macaca fascicularis ENSP00000260045 I
ENSMMUP00000040972 Macaca fascicularis ENSMMUP00000040972 I
ENSMMUG00000022399 Macaca mulatta ENSMMUG00000022399 I
ENSMMUG00000013164 Macaca mulatta ENSMMUG00000013164 I
ENSMEUG00000011765 Macropus eugenii ENSMEUG00000011765 I
THAP12 Meleagris gallopavo ENSMGAG00000015267 I
THAP12 Monodelphis domestica ENSMODG00000005315 I
ENSMLUG00000000564 Myotis lucifugus ENSMLUG00000000564 I
ENSNLEG00000005175 Nomascus leucogenys ENSNLEG00000005175 I
ENSONIG00000011168 Oreochromis niloticus ENSONIG00000011168 I
THAP12 Ornithorhynchus anatinus ENSOANG00000000831 I
prkrirb Oryzias latipes ENSORLG00000005427 D
ENSOGAG00000024748 Otolemur garnettii ENSOGAG00000024748 N
ENSOARG00000012702 Ovis aries ENSOARG00000012702 I
THAP12 Pan troglodytes ENSPTRG00000004091 I
ENSPFOG00000009414 Poecilia formosa ENSPFOG00000009414 I
Pvit_02386 Pogona vitticeps Pvit_02386 I
ENSPCAG00000008407 Procavia capensis ENSPCAG00000008407 I
THAP12 Taeniopygia guttata ENSTGUG00000013565 I
prkrirb Takifugu rubripes ENSTRUG00000007070 I
ENSTSYG00000001778 Tarsius syrichta ENSTSYG00000001778 I
ENSTSYG00000000689 Tarsius syrichta ENSTSYG00000000689 I
prkrirb Tetraodon nigroviridis ENSTNIG00000003292 D
THAP12 Tursiops truncatus ENSTTRG00000013287 I
ENSTTRG00000012793 Tursiops truncatus ENSTTRG00000012793 I
thap12 Xenopus tropicalis XB-GENE-6073216 I
ENSXMAG00000001706 Xiphophorus maculatus ENSXMAG00000001706 I