CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0001626001
(
Gongylonema pulchrum
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
GPUH_0001626001
T251991_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0001626001-mRNA-1
MADF
12
83
AYFSRKLFQDSASRSPAANLERNKIWRQITEEINKKYSHLNTLTYEQCKKLCKYYKRKDPTNYGIAFHSMHG
GPUH_0001626001-mRNA-1
MADF
189
268
CKLAENFNGVFDSHSRLYHINAERNQVWKQITDTANEKFGAELGDLTIEQTKKLYANYRRKSQAPSFGSATSTGEMLRSE
Links
Other
MADF
family TFs
Other
Gongylonema pulchrum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG004678.1
Alligator sinensis
Alligator_sinensis_CCG004678.1
N
e_gw.479.83.1
Branchiostoma floridae
e_gw.479.83.1
N
estExt_gwp.C_860189
Branchiostoma floridae
estExt_gwp.C_860189
N
Cmyd_10017930
Chelonia mydas
Cmyd_10017930
N
ENSGMOG00000018099
Gadus morhua
ENSGMOG00000018099
N
ENSMGAG00000017003
Meleagris gallopavo
ENSMGAG00000017003
N
ENSMODG00000004875
Monodelphis domestica
ENSMODG00000004875
N
Myotis_brandtii_Lass6_10034918
Myotis brandtii
Myotis_brandtii_Lass6_10034918
N
ENSONIG00000019701
Oreochromis niloticus
ENSONIG00000019701
N
ENSONIG00000017329
Oreochromis niloticus
ENSONIG00000017329
N
ENSOARG00000017904
Ovis aries
ENSOARG00000017904
N
ENSPMAG00000008848
Petromyzon marinus
ENSPMAG00000008848
N
ENSSHAG00000001540
Sarcophilus harrisii
ENSSHAG00000001540
N
ENSSHAG00000001747
Sarcophilus harrisii
ENSSHAG00000001747
N
ENSSHAG00000003870
Sarcophilus harrisii
ENSSHAG00000003870
N
cers3b
Takifugu rubripes
ENSTRUG00000004671
N
CERS5
Tetraodon nigroviridis
ENSTNIG00000017897
N
AAL89720
Xenopus laevis
AAL89720
N
cers5.S
Xenopus laevis
XB-GENE-866438
N
ENSXMAG00000010322
Xiphophorus maculatus
ENSXMAG00000010322
N